EST details — SGN-E391695

Search information 
Request: 391695Match: SGN-E391695
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177782Clone name: TUS-27-H4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177782 is on microarray TOM1 spot ID 1-1-5.4.6.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62162 [cLEM-1-K4] Trace: SGN-T83579 EST: SGN-E270206 Direction: 5' Facility: TIGR
Clone: SGN-C177782 [TUS-27-H4] Trace: SGN-T193268 EST: SGN-E391942 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391695Length: 661 bp (860 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391695 [] (trimmed) GCTTTCCCATCTTCTTATTTTCCAACTTTCTTCCAATGGCCAGTGTTGAGGTTGAATCTGCACCAGTAGCACCAGTAGAGACTACTCCAGCTGAG
GTTGAAGTTACCCCAGCTCCAGAGGTAAACAAGGCGGAGGAACCAGCCCCCGCTGTAGAAAAGGATGTTGAGGTCGAATCAGCACCAGCACCAGA
AGAGGCTGCTCCTGCTGCGGAGGAAGTAGCAGCCCCTGTAGCTGAAGAGCCTGCGGCTGCAGAACCTGTAGCCGCAGAATCAGAAGAGCCAGTGG
CAGTTGCAGCAGAACCTGTTGCAGCTCCAGTTGAAGAACCTGTGGCTGCAGAAGAACCTGCAGCCGCAGCTGAGGAACCGGTTGCTGCAGCACCC
GTTGAGGAGGCTCCAGCACCCGTAGCTGAACCCGAAGCAGCCCCAGTTGCAGAACCCGAAGCAGAGAAAACAGAGGAATCTGCCCCTGCATCTGA
GGAGCCAGAGAAAGTTGAAGAGTAAAATTCAAATGGTTGATGAATGATGGTTTTTTTTTTTTTTTTTATATTGAAATTTGGTTGTGTTTATTGTG
TTTTTTAGTTGAGTATTTTATTTACTGCTACTATTATTATTACTAAAACTATATTTTAAATATAATATGGTTACAATGAAAGGCTAATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391695] SGN-U581194 Tomato 200607 Build 2 457 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193021 [Download][View] Facility Assigned ID: FA0AAD15DD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5