EST details — SGN-E391516

Search information 
Request: 391516Match: SGN-E391516
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173497Clone name: TUS-16-E15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173497 is on microarray TOM1 spot ID 1-1-2.1.18.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2719 [cLEC-16-O20] Trace: SGN-T26886 EST: SGN-E204997 Direction: 5' Facility: TIGR
Clone: SGN-C173497 [TUS-16-E15] Trace: SGN-T192841 EST: SGN-E391515 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391516Length: 647 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391516 [] (trimmed) AATATGTTCCCCAAATCGTTCTTCACTCTCCTATTTATCTTCATTTTATCTACCGCCGTGTACGGCGGCCGGGTAATCGTCGATCAGTCATCGTC
GGATCTCATCTCCGATGGAGTTCACGGCGGCGGAGGCAGAAATAGTACTAGTATTGGCCGTGAAAGAGGAATTATCTCGCTATTTGCTGCACCAG
TAGAAGAGGCATGTGAACAGAGCTATGGATTTTTGCCGTGCACTAAAACTGCTCTAGGAAATGTGTTCCTTATTGTTGTGTATGGTTACCTTATG
TTTACGGCGGCTACGTACCTCTCCTCCGGTAGCGAGTTATTGCTTGAAATTTTGGGGCCGGGTCTAATCGGTGGACTTTTCCTGCCGATTCTCGG
TGCTCTTCCTGATGCTATGCTTATTCTCGTATCCGGGATTACTGGAAGTGCTGCAGAAGCTCAGAGCCAGGTCTCTGTAGGAATAGGCTTGTTAG
CTGGGTCGACAGTGATGCTTCTTACTGCGATATGGGGAACCTGTTGCACTGTTGGCAAGTGTGATATAGTAAATTCTATTGCTGTGGACTTGAAA
GACACTAAAGGGCTCAGTTTTACTGGTTCTGGTGTTAGTACTGATATCTGGACAAGCTATGCTGCAATGATCATGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391516] SGN-U577218 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192842 [Download][View] Facility Assigned ID: FA0AAD4AC08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0009 Quality Trim Threshold: 14.5