EST details — SGN-E391515

Search information 
Request: 391515Match: SGN-E391515
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173497Clone name: TUS-16-E15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173497 is on microarray TOM1 spot ID 1-1-2.1.18.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2719 [cLEC-16-O20] Trace: SGN-T26886 EST: SGN-E204997 Direction: 5' Facility: TIGR
Clone: SGN-C173497 [TUS-16-E15] Trace: SGN-T192842 EST: SGN-E391516 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391515Length: 600 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391515 [] (trimmed) AAGTATATCCGGAATACTAAAAATCCCGTACATAATAAGCATAATATTTGGAATTTCAAATTACATGTAAAAACAAGGTTTCCCCCCTCTGGCAA
AAACAATTGAAATTTATAATCAAAAAGTTTTGACCCATTCAAAACGACAAATGGGCCCTGCTGCTCAAAAAATACACCCCAACACTGTCTGATCT
TTGTAACATACAATGATCGATCTATGACCAACCAAAAACGTATTCAAAAACATACCCGAATACAAGGGAAAACGGATAAAAAGCAAAAGCTATCA
AACTAGTCCACAAAGGAAAGGGGGGGCGGATGCCCCCTAAAACCCCCATAACAATGCAAACAATTAGGAAAACCAGCACTTCAAAAGAAAAGTTC
CATGTTAAACCCCGGGCATAAACAATACCCAAAAAAACTGAAAAACAAAGGAAATTGTTCATAGTCCCAGCTCCCTATAACTCAAAAAATGTTAA
TGACCCGGATCTCTGCTTTTTCCGGGTAGCAAAAATTATAGCCGACACCGCCTCACTGGAGTTTGTTGCCAAAGGCAGTGCAATGAATGAAAAAA
AGAAAGATGGAATACTTGGGGCCCTGGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391515] SGN-U581204 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192841 [Download][View] Facility Assigned ID: FA0AAD4AC08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.935 Expected Error Rate: 0.0216 Quality Trim Threshold: 14.5