EST details — SGN-E391493

Search information 
Request: 391493Match: SGN-E391493
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C186045Clone name: TUS-48-P11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186045 is on microarray TOM1 spot ID 1-1-6.4.7.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73493 [cLER-5-A4] Trace: SGN-T93151 EST: SGN-E279642 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391493Length: 538 bp (902 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391493 [] (trimmed) CCGGGGGGGCGGCCGCCCAAAAATTAGGGAACCCCCCGGGCTGCAGGTTTTTTTTTATAAAATATTAAACTTGAGGTATATTAATCAACCCCCAG
TTAGGGACTTTCAGCAACATTCAATTATAACATCAAATAAACCCAAAAATTCAAAGATGTCAAAAACCCTAATAAACCGAAAACGTACTGATATA
ACCTCTCTTCAGCAGAGATAGAAGAAAGATGACTTTAAATCTAAGTCAATAGTCTGCATGACCTCCTCAGCAGTGAACTTTGTACCCTTATCCTT
GTCAGCAGCAGAACGACCCTTAGCCTTACGATCCAACAAAGACTTACGATCCTTATCGAGTCTGAGTTTGGTAACAACAACCTTAGATGGATTAA
TGAGGGCATTAACAGTAGATCCGTTAACCTTCTCTCTAGTTATACGTTCAATGTGAATAACCCATTTCTAACGGAACACTTGCATAACTTTGCCT
TCACGGCCCTTGTAGGTTCCTCTTACTACGGGAACTTCATCGTCTTTCCTTACCGGGATAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391493] SGN-U578367 Tomato 200607 Build 2 72 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192819 [Download][View] Facility Assigned ID: FA0AAD36CH06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0285 Quality Trim Threshold: 12.5