EST details — SGN-E391480

Search information 
Request: 391480Match: SGN-E391480
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185957Clone name: TUS-48-L19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185957 is on microarray TOM1 spot ID 1-1-6.4.7.14 [Order] [Tomato Microarray Database]
See unigene SGN-U579791 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C185957 [TUS-48-L19] Trace: SGN-T192561 EST: SGN-E391235 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391480Length: 621 bp (909 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391480 [] (trimmed) AAAAGAGAATATCAAAATGTTTGTATAGTATTTGAAAGAGGAAGAATCCTTTCATTACACATATGAATAGCCTAATTCATAGGATTGAAGATTCA
AATTGGGAATAAAATAGAGCGGAGTGCTTAAATAACACAAAACTAGTACACTATCAATTATCATATGTACGGCACTCATCAGTCTCTGGATTTTC
CTTGCAATAATTTTCCAAAACATCTTCCTGCTTCTTCTTGTCCCTTGCATGACTAGCCGCTGCACTTGCCTCTTCCACAACATCCCAAGCCGCCG
CGCATTCTCCGCTAGCCGGGTTCTCATTGCACGTTTCCTCTGCCCCTTTAACACTATCAGCCACAAGGTCAGAAAGCTTGTTATCTGGTGCTGCT
GAACACACAAGACCAAATTTTGTTGATGATTTTTTCCATGGATTGTTAAGGCAGGGCAACTTAAATGGCTTAAAATTGGGGGAGTTGGAATTCTT
GGCCAAGAATTTTGGACTAGTGAGACTAACACCAGCAATGGTTGCCATTTTTTTGTTTTTGGTTTGTGCTCTCTCTCTCTAAGGGTGACCTGAGA
TCACATACAAAAATGGTGAAGGCCGTCGCCGTCCTTAACAGCAGTGAAGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391480] SGN-U579791 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192806 [Download][View] Facility Assigned ID: FA0AAD36CF10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5