EST details — SGN-E391444

Search information 
Request: 391444Match: SGN-E391444
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C186040Clone name: TUS-48-P6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186040 is on microarray TOM1 spot ID 1-1-3.4.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70012 [cLER-13-E6] Trace: SGN-T94587 EST: SGN-E283893 Direction: 5' Facility: TIGR
Clone: SGN-C186040 [TUS-48-P6] Trace: SGN-T197685 EST: SGN-E396359 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391444Length: 668 bp (879 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391444 [] (trimmed) TATTCTCGAGCATTTCGATACCTTCATAATTCGGTGTCAAGGTGGCTTTTGATTCTTTGAAATCGTGCGGTAAATCAAGCTTATCGAACTACAAG
TGGCCTGAATTCGGCCGATTTCGAAGTGAAGCTATAAACCTGCATCCACAGAAAAATTGTCAGTTTTAAACATACTGATCTGTGTCGATCCCTTC
GATTGTTTGCTCCTTGTCTTGACGTCCTCGGTTGATTTCCCGATTTCTCGACTCTTGATAGATAAGAAAATATCTTATGCCAAAACAGATGAAAT
ATAAAAGGGAAATTTTTAAGAGAAGCAAGAAATTTTTTAAGAAATAGTATCTCGAAAAAGTCAATGCCAAGTCATGTCATGTCAGGCTTAACGAG
CTTCTTTGAGTCCGACGCTTGTCGAATGAATTTCAGAGGCATTCCAGACTTGTGGGGAAGTCCCATGACGAAATTTTGAGGCCATCCTCAAAATT
TCTGTCCCAGTTTAGTATCTTGTTCATCTTTCCATTGTAACCGAACAGATCTCGGAATTTTTGAGATCTTCTAAAAAATTCTGTCCCAGTCGCAA
ATTCGAAATGTCTTTAGTTTGATCCGCTGAAAAGAAGGTTCCTTCTGGAGAATTTTTGAGTCCCTCTCAAAATTCTGTCCCAGTTTCTATTGTAA
AAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391444] SGN-U572461 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192770 [Download][View] Facility Assigned ID: FA0AAD36DH03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5