EST details — SGN-E391277

Search information 
Request: 391277Match: SGN-E391277
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185629Clone name: TUS-47-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185629 is on microarray TOM1 spot ID 1-1-6.3.9.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22091 [cLED-36-H19] Trace: SGN-T57803 EST: SGN-E241633 Direction: 5' Facility: TIGR
Clone: SGN-C185629 [TUS-47-O3] Trace: SGN-T192097 EST: SGN-E390771 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391277Length: 736 bp (851 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391277 [] (trimmed) AAGTTCCAACATCACCAATTCACCATATTTGATAATGCAAAAGGATTCTTTGTAACTACTGTACATATTTAAATGCCCTTTGCTGAATATACAAA
TTGATGTCAAACTTTTGACATAGCAAAATAAATAATTTGTTTAATTGGACTAGTAATAACTACACAAAGTTTTTGATCATTTCTCTCACTTCTTC
AATTACAAGCCACGCCTTGTGCCCTCCAATCACCTCAGCTTTCATTTCTCCATATTTCCACAACTGAATTGTTGGCATTTTTGAGATGTTTCCTC
TCTTCACTAAAGTTTGTGGCACTTTATTGACATCCACATAGTAAAATTTGACTTTGGTATCAAACTCAGCAGCAAGTTTCTCCAATTTAGGCTTC
AAATATATGCATTTCCGGCACCAAGCTGCCATCCAATCAATGATGACAGGTTGTGAAAGCTCTTTAGCAGAGTCTAAAATCTGATCAAGTTGTTC
ACTACTCTCAATTGGTTGCATCTCAACAGCAGCTGGTCTTGACAAATCTGGCCAAGAGGCATGAATTCTTAACTCCCTTTTCATTTTCTTCTTCC
AATCACCTCTTCTTTTATCAACAAAACAAAATCCATATGATTTTACAATATTAACATTCCCTCCACTGTTCAAAAACAGATGCTGATTCTCCCTA
TTGTAGATTTCTCTGTACAAAATTTGGGAATTTGGTGCTAAAATAGACATTTTTTAGAAGTTTTTGGTACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391277] SGN-U570719 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192603 [Download][View] Facility Assigned ID: FA0AAD35AH02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.931 Expected Error Rate: 0.0016 Quality Trim Threshold: 14.5