EST details — SGN-E391275

Search information 
Request: 391275Match: SGN-E391275
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185599Clone name: TUS-47-M21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185599 is on microarray TOM1 spot ID 1-1-4.1.9.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3420 [cLEC-20-I13] Trace: SGN-T27724 EST: SGN-E205942 Direction: 5' Facility: TIGR
Clone: SGN-C185599 [TUS-47-M21] Trace: SGN-T192095 EST: SGN-E390769 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391275Length: 693 bp (860 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391275 [] (trimmed) ATAAAACTTCTGAAAATTGAATTAGCTCCCCTTTTAGCAAATCGAAGCATAATGTACATTAGCACCTAGTAAGAATTAAACTGAACATAAACATT
GACAATATCAAACAAAATTATTCTCTTAGCAACTGTGCCTATGAATGCTTCCACACTGATATTGACAATATGAAGTTTGGATCTCCTTTCAAACT
CCACCTACTTTGTATCCTAACTCTCATAAAATGGAAGCTCTGATAAGGCGCCGAAGAAACTTAGGTAGATGATAGAAGATACAATATACATGTCT
CGCTCAATTAAGCATTCGGAAGCTTGTACTCCAGCATCTCCCTTACGTTTAACCGAATGGATGGCCCCATCGACGAGCATACATGTGCACTCTTC
CAATAAACTCCTTTAGCACCTGATGGTTTGTTTGCTTCCACCGATTTCACTGCTGCAATGAAGTTTATGATAAGATCTTCTTCCGAGAAATTTGC
TTTTCCAAATGGCAAGTGAACAATTCCAGTTTTATCTGCTCGGTATTCTACTTTACCCTTTTTGAATTCTTCGATAGCCTGAGGTATATTTGTAG
TGACAGTACCAGCTTTTGGGTTTGGCATGAGTCCTCTAGGACCAGGGACCCTACCTAAGCTAGCAACCTTAGGCATCATATCTGGTGTTGCAATC
AATTTGTCAAACTCCATAAATCCTCCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391275] SGN-U572027 Tomato 200607 Build 2 84 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192601 [Download][View] Facility Assigned ID: FA0AAD35AG11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5