EST details — SGN-E391037
| Search information |
| Request: 391037 | Match: SGN-E391037 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185607 | Clone name: TUS-47-N5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185607 is on microarray TOM1 spot ID 1-1-4.2.9.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C17566 [cLED-1-C5] | Trace: SGN-T48474 | EST: SGN-E226962 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C17566 [cLED-1-C5] | Trace: SGN-T48475 | EST: SGN-E226963 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C185607 [TUS-47-N5] | Trace: SGN-T192633 | EST: SGN-E391307 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E391037 | Length: 227 bp (938 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E391037 [] (trimmed)
ACTACAGCAGGCATCTTGTCAGCAGCGAACGATCCACGGCAACCGTCGACGGCAAAGCCGCACAAGCCTTCGCAGGGCGCTCCACAATATCTTCC
TATAGATTACTCCGGCTTCATAGCCGTCATCTGCGGCGTCTTTGGTGCCATGTTTATATACAAGATTTGCTCGTGGCTTGCTATTATATTCAGTG
CTCAATCCCTTGCTAACATGAGGAATATGGAAAATGA
TATAGATTACTCCGGCTTCATAGCCGTCATCTGCGGCGTCTTTGGTGCCATGTTTATATACAAGATTTGCTCGTGGCTTGCTATTATATTCAGTG
CTCAATCCCTTGCTAACATGAGGAATATGGAAAATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391037] | SGN-U577790 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T192363 [Download][View] | Facility Assigned ID: FA0AAD35CG03RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0302 | Quality Trim Threshold: 14.5 |
Working
