EST details — SGN-E390947

Search information 
Request: 390947Match: SGN-E390947
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185178Clone name: TUS-46-L8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185178 is on microarray TOM1 spot ID 1-1-1.4.12.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C92454 [cLEX-11-F21] Trace: SGN-T116919 EST: SGN-E304563 Direction: 5' Facility: TIGR
Clone: SGN-C185178 [TUS-46-L8] Trace: SGN-T192026 EST: SGN-E390700 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390947Length: 550 bp (884 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390947 [] (trimmed) CACATCTTACTCTTAACAACATGTATATACATATACATATTATATAGCAGCTTTGATATGCATTTTTTTGGTGTGTGTGTGGGTAACGTACTGAT
TAACCACATCACGTTTGATTCATGATCCATACATGGCGTCTACTAAAAATTTCCACTACCTAAACGGCGGCGACAGTCTCGCTTGTGGCGGAAAC
GTCATATCCCTTCCCGCCGGCTACGGCGGCAGCGACGGAGTTCTTCATGTAATCCTTTCTAGATGCAACCAACGAACACTTGTCCTTCTTCTCAT
CTAGATTCATCTGCTGCTGTCTACACTCAAGACTGCAAAAAGCACTATCTCCTCTGTACATGTAGATATCCCGGCCAGGGATTAACCGGCGTTTA
CAGAGGAAGCAAGCTTTCAAAAAATTAGCAGTTTCTAGAAAATCAGCAGATTTACGGCGGTTTCTGACGGAAACGGTTTTCGCTGCTGTCAATAA
ACGTTGTTGATCTAGGTGTTGCTGCTGGGTGTTTGCAAGTGAAAAAGGATTGTGAGGATCGAATGGATTATTGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390947] SGN-U580528 Tomato 200607 Build 2 56 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192273 [Download][View] Facility Assigned ID: FA0AAD34DF04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0100 Quality Trim Threshold: 14.5