EST details — SGN-E390829

Search information 
Request: 390829Match: SGN-E390829
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184196Clone name: TUS-44-C10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184196 is on microarray TOM1 spot ID 1-1-7.3.16.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17686 [cLED-20-C19] Trace: SGN-T53689 EST: SGN-E236172 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E390829Length: 393 bp (882 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390829 [] (trimmed) ACCCTGATTTCAACACAATTCCAATTTATTTTTAGAAACGAATGTTATTATATCTAATAATTCTTTGTCACTTACTACTCCCTGAATTATGAGAA
TCATTTCCCTTAAATTTCTCCCTAGCTTCTTTAGCTGCTTATTGAGTTGATCTTAAACAATATTTCATCAGATCATCATCATTATCATTATTGTT
ATCATTGATAGGCCACGTATCGTCGTTGTCTTGTTGTTGATCCCTTGTTATGAACAAGACATTTCTCACACGTCCACCAAGTGTTGTTATTTCAG
CCTTGAGTGTTTTTAACCTTATAGATTTTAAGGTCTTGATTATGTCATGTAAAATATCAGACCTATCTTCACAACCTAATGAAACTTTGATCATG
AAATTTCCTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390829] SGN-U587357 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192155 [Download][View] Facility Assigned ID: FA0AAD32BB05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.926 Expected Error Rate: 0.0470 Quality Trim Threshold: 14.5