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EST details — SGN-E390825

Search information 
Request: 390825Match: SGN-E390825
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184160Clone name: TUS-44-A22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184160 is on microarray TOM1 spot ID 1-1-3.1.16.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17153 [cLED-18-N12] Trace: SGN-T53343 EST: SGN-E238040 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390825Length: 645 bp (846 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E390825 [] (trimmed) CAGGAAAAAGAGTCCTTCATCAACAATCGGTGATTTGGAAGGTTCAACTAAGAGTCACAAGAAGAAGAAAGCGCGTGAACCAAAAGACGACCAGG
AGGAGGGACCTGAAGTGATGAAGGCTAATGATGAGAGATCAGATGATGAGATGTCAAAACGAACTAAAACTGAGGAGAAAGACGGTAAATCTGAA
GAAGGATCCAAGAAGGACAAGAAGAAGCATAAGCGAAGCTCAAATAAATCATCCTCAAAGAAGGAAGCTGGAGAAGTTAAAACCAAGAAAACTCC
TTCAAATTCATCAAAAAGCTCAAAGAAAAATGATAACAACGATGCAAATTCAGAAGTGCATTCAAAGAAGAAAACTACTGAAGTAGTTAAGGGAA
ATTCATCTACACCAAAAAAACCTAGTTCAAAAGACAAAACTGGGAAAAAAGATCCGAATGGGAAGGGCCATAAGAAAGCGAATAAATTGAAGCCA
AGTGATGATGAACTCAGAAGTGCAATTTGTGAAGTTCTAAAAGAAGTTGACTTTAATACGGCCACCTTTACCGACATTGTGCAAATGCTTGCCAA
GCGGTATGATACCGATCTTACACTCAGAAAGACATCTGTTAAGAATATGATCCAGGATGAGCTCACTAGGCTAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390825] SGN-U576784 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192151 [Download][View] Facility Assigned ID: FA0AAD32BA11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5