EST details — SGN-E390821

Search information 
Request: 390821Match: SGN-E390821
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184152Clone name: TUS-44-A14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184152 is on microarray TOM1 spot ID 1-1-3.1.16.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16988 [cLED-18-D7] Trace: SGN-T53271 EST: SGN-E237968 Direction: 5' Facility: TIGR
Clone: SGN-C184152 [TUS-44-A14] Trace: SGN-T192146 EST: SGN-E390820 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390821Length: 551 bp (868 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390821 [] (trimmed) TTTATTTTAATAGACTGATTGATTGGTTAATGATGAAAAACAAGTCCCTATTTTAATTTGTTGTCTTTTATTTGTATTTTTTTCTCTATTGCTAT
TGAGTTAACCCCTTTTATTCATATCCACATCTTTTAATTTTCTTGTATTATTTTGCTATTCTAAAACATCACTATACAAATATTTGGTGTTTTTG
TATAATTCCTTTCAACAATTTCAATTTTCACATTACAAATTCTCCAGTCCTGTCAATTCTGTTTTTTGTCAAACCAAAGAATTAAGGAGATAAAC
TAATCTTATCATCATGAAGAGGTTCAGTTTCTCAGATTCTTCTGGCAAATTGCTTTATCCAACTGAAGAGAAAAATACAGAGAATTTGGGATATA
GCAATGAATTTCAGGCAATGTTGGATGGATTGGAAGATGAAGATGGGATAGAAGAAAGTGGATGTGGAACAGGGAAGAAAAGGAGGTTAAGAGTA
GATCAAGTTCAAGCACTGGAGAAAATTTTCGAGGTTGATAATAAACTTGATTCCTGATAGAAAAGTTAAAATTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390821] SGN-U579283 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192147 [Download][View] Facility Assigned ID: FA0AAD32BA07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.911 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5