EST details — SGN-E390804

Search information 
Request: 390804Match: SGN-E390804
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184381Clone name: TUS-44-K3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184381 is on microarray TOM1 spot ID 1-1-6.3.16.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15564 [cLED-13-E6] Trace: SGN-T51655 EST: SGN-E236377 Direction: 5' Facility: TIGR
Clone: SGN-C184381 [TUS-44-K3] Trace: SGN-T191900 EST: SGN-E390574 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390804Length: 528 bp (862 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390804 [] (trimmed) AATCAATCTTGTATTAGCTGTGTGTCCAATGAAACTCCACTTTAACTACAATGCTGTATTACTACTTAATACTGCAACAATGACAAGGAGATGAC
ACTGATCTTTTGATTTTAAAAAAAGGCGATGCAACTAATGGCATCAGTCGTACTGGACAACTAAGTGTCTCTTCTGATGACACATCCTCAATGAA
ATAGAGCAAATCTAGATAAACAAAGGAGCATAAGGCACACGTTCTGTTAAAGACAAAAATTTCTAATGTCTCATTACTCCTCTCTCGCCAAAATG
TTTGTGTCTTGTTAACACCAGAGAGTTCACTTAGAATATAGGAGAAACTGTCACTGAATCATGCCTCATGGGAAGATAGCATCAACAAATTCCTC
AGCATTGAATGGTTGGAGGTCATCTACACCTTCCCCAACACCTACAAATTTTACAGGAATACCAAGCTCATCAACCACACTGACCACACAGCCAC
CTCGAGCAGAACCATCAAGTTTAGTCAATATTAACCCAGTGATTCCAACAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390804] SGN-U564414 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192130 [Download][View] Facility Assigned ID: FA0AAD32AF02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0027 Quality Trim Threshold: 12.5