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EST details — SGN-E390744

Search information 
Request: 390744Match: SGN-E390744
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185445Clone name: TUS-47-G11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185445 is on microarray TOM1 spot ID 1-1-6.3.9.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77968 [cLES-3-N5] Trace: SGN-T97728 EST: SGN-E284707 Direction: 5' Facility: TIGR
Clone: SGN-C185445 [TUS-47-G11] Trace: SGN-T192069 EST: SGN-E390743 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390744Length: 547 bp (915 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390744 [] (trimmed) CAGATGGCTCATCAGTCTCTTTACCTTCTCTTCCTCGTTGTCTTGTCATCAATCAGGAGCCATGTAATTCAAGTTGAGGCTCGCCATCTTCTGGA
CGCAACTTTGCCAGATCTCCCCATTGGTCTCCCAAAACCTGAGCTACCAACATTACCTATGCCCAATCTTCCACTGCCGCAGCCTGGATTGCCCA
CACTACCTATGCCCAATCTTCCACTGCCGCAGCCTGGACTGCCCACATTACCTATGCCTAATCTTCCTCAGCCACAACTTCCAAACCCTCAGCTG
CCACCTTTGCCCAAACCGGATTTGCCATTACCTATGCCACAACTTCCCAAACCTCAGCTACCTCTGCCACAGTTGCCAATACCATTGCCACCTCT
GCCAAGCCCTTAAGTACTAATGTTCCTTCAATGATTGGGAAGTGTACTACGTGCTATCCAGGATGATTCGTTTGTATCATTATTGTCGTATTTGT
GAACCTGCTCATGTTAATGTTGTTAAACTTTCGTATGTAATCTCTTATTAGTAAGTCAATTGTTTGTCAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390744] SGN-U577489 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192070 [Download][View] Facility Assigned ID: FA0AAD35AD06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0002 Quality Trim Threshold: 12.5