EST details — SGN-E390732

Search information 
Request: 390732Match: SGN-E390732
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185353Clone name: TUS-47-C15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185353 is on microarray TOM1 spot ID 1-1-2.3.9.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69754 [cLER-12-H6] Trace: SGN-T94290 EST: SGN-E283323 Direction: 5' Facility: TIGR
Clone: SGN-C185353 [TUS-47-C15] Trace: SGN-T192057 EST: SGN-E390731 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390732Length: 438 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390732 [] (trimmed) CTTCTCTCTACATCGTCTTCGTCCGAGCTCTTCCCTATCAGAATTTTGCTACATTCGGATTCAAATGGCTGGCCATAGGATTGCACATGCCACAT
TGAAAGGACCTAGTGTGGTCAAGGAAATAGTTATCGCAAGTGTACTTGGTTTGGCTGCTGGAAGCTTGTGGAAGATGCACCACTGGAACGAGCAA
AGAAAAGTTAGGTCATTTTATGACTTGCTGGAGAAGGGTGAAATAAGTATAGTTGCAGAAGAATAGTTTCTCAAGGATCATCTCCTGTGATTTGT
CTCTTCAATTAAACATGGACATACTCCTATATCGAAAAAAAAATAAGTTTGCAAACCAAGTATTTCTCTGTCTATTTGTTGCTCCATGTTTGACT
TCGAAGTTTTTGATTGTTATTGACCTGCTTGGACAGGCTGGAATGAATTTTCTTTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390732] SGN-U582643 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192058 [Download][View] Facility Assigned ID: FA0AAD35AB08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5