EST details — SGN-E390463

Search information 
Request: 390463Match: SGN-E390463
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182623Clone name: TUS-40-A21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182623 is on microarray TOM1 spot ID 1-1-4.1.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182623 [TUS-40-A21] Trace: SGN-T191566 EST: SGN-E390240 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390463Length: 742 bp (864 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390463 [] (trimmed) CAAAAAAAAAACAAAAAAATAATTTCTGCTTTCAGTTTCTTCTTTTGTAAAACCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTG
CACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGTTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTT
TGAAGGTTTCGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCACAAAGGCAC
AGTTGGATGAAATTCTCGGACCTGCTGAGTGCACCATTGTTGATAACCTGTCAAATGACTATGTTGATTCCTATGTGCTGTCCGAGTCGAGCCTC
TTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGTACCACAAAGCTGCTTCTTGCAATTCCGCCCATTCTGAGGTTGGCTGAGACCTTGTC
TCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTG
TCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGAAATCCCGACAAAACACAGAAATGGCATGTCTACTCTGCC
TCAGCTGGGACTGTTCAGTGTAATGACCCTGTTTACCCTCTTGAGATGTGTATGACTGGTTTGAACAGGGAGAAAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390463] SGN-U580064 Tomato 200607 Build 2 541 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191789 [Download][View] Facility Assigned ID: FA0AAD28AA11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5