EST details — SGN-E390448

Search information 
Request: 390448Match: SGN-E390448
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182544Clone name: TUS-39-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182544 is on microarray TOM1 spot ID 1-1-3.2.8.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182544 [TUS-39-N14] Trace: SGN-T191550 EST: SGN-E390224 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390448Length: 600 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390448 [] (trimmed - flagged) ATCTTATATTTAGGTACTCATAAATCCAAAACATAAACCCATTATTACAAGACACAAAGAGTTTGTTGGAATTAAGACAAAAAAGAAAAAAGACC
TAAGTAGCTTTTAAAAACAAAGTGTCCCTAAAGACAATTTTGTTCCTAATATGAAACTTAGTAGCCTTCTGGCTTGTAGGCAATGAAACTGATAC
ACTGCACTTGACGCACATTGTCGAATCCAATGATTCTGACCCATGCTTGTGGGTATGCCTTTTTAGCCTCTTGAACCTCAGCCAACACTTGGGTT
GCCGGCAACTGAAGTTCTTCCAAAAGCTAAGGTTGTTTAGAATGTACGATCAATCATCTTGAGATGTAAAATCTATCCATGGATTAATTCCATGT
TTTCATTTGCTGAATGGCAATTGCTTTGCTCCACTCTCTACAGCATCTCTCCATATTCTATACCTCACTCCTAGCTTATCGTATGATACAGGCAG
GTTCCAAATGTTAGCACCCTTGAGAATCCGGTCTTGTTGACCAATCACAAGCCGTAGGTCTTCATTTAAAACCTGTTCAGCAAAATGCCTCCACA
CTTATTGCATGAAAGGCATGTGTTTTAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T191774 [Download][View] Facility Assigned ID: FA0AAD27DG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: Possibly chimeric (ends match significantly different genes in arabidopsis)
Sequence Entropy: 0.942 Expected Error Rate: 0.0144 Quality Trim Threshold: 20.5