EST details — SGN-E390358

Search information 
Request: 390358Match: SGN-E390358
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182999Clone name: TUS-41-A13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182999 is on microarray TOM1 spot ID 1-1-4.1.3.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C128899 [cTOC-9-H9] Trace: SGN-T137571 EST: SGN-E324562 Direction: 5' Facility: TIGR
Clone: SGN-C182999 [TUS-41-A13] Trace: SGN-T191465 EST: SGN-E390139 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390358Length: 539 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390358 [] (trimmed) GCAACCGTACTTTTGATGAGGCTGCAAATTGTACATCAATGGTGGCGCTCGTGTACAAAAAAAAGAATTTTTACAGGGCTATAAGGATACAAAAG
AATTATAAGTTGTTGGAACATGACTAATGCTTTTATCAATCATACACAAAAGAGAGAAAAGCACCTTGGAACAGAGTTGCTACTCGGGACCAGTT
GATTCTCTCTTTAATTGTAATTTCCCAAATTCGTCTCTATTGAGAAGTGTTTCAACTACTTCGTGCAAGCTAGTTCTTGCATCACTTCCCTGGGC
TTTGCTTGTGGATGCATCTTCGTCGTGTTTTTGAGATGCCTCAAAAGTTATATCCTCTATGGGTTCTTCTTCCTCTTTTTGTGTTGAGGATTCCT
CTTCCCCTACGCCCACAGCGTGTGGTATATTTAAACTGACGGCTCTTTCGATTGCATCCTTGTGCTCTTTTTCTAATGTCTTCAGTCTTTCGAAT
TTCTGCACTTTAGGGGGAGAAGTGGTGGTCTCCGCACTACCCTCCTTAAGTCTTGCAAATGCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390358] SGN-U562819 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191684 [Download][View] Facility Assigned ID: FA0AAD29AA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5