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EST details — SGN-E390346

Search information 
Request: 390346Match: SGN-E390346
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173822Clone name: TUS-17-C4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173822 is on microarray TOM1 spot ID 1-1-5.3.18.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5607 [cLEC-32-H10] Trace: SGN-T29893 EST: SGN-E207680 Direction: 5' Facility: TIGR
Clone: SGN-C173822 [TUS-17-C4] Trace: SGN-T191673 EST: SGN-E390347 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390346Length: 649 bp (845 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390346 [] (trimmed) AGGGCAGATACAGTAGCTCTGGTAAGAAAAGCAAATCTGGGCGTTTCTTACACATTGGAGAAAAAGAAACTAGGCAATACCTAAATCATACGACT
AAAAATACGACAACACTCAACTACTTACTGTCTTGAAATCCTAGCATCCCTCATTTTTCTCTCTCAATCAGTCAAGATAAACAAACGAATTCAAG
AGAACAGAACAAACCACCTTCACCAGCTGATTGCTTTCTTCACTTTCGATCTAATCACCTTCGCTCCGGCTGGGTTTTGAGGAGGTGAATCCAAC
CTGATAATCATCTTTACTCGGAATCCAGTCGTTTGTCGCCGGATTAGTTTTGAACTCTTTGGCTCTACCATTCTCATAACCACCATTCAACTGAA
GATCGTAAATGTTTCCATTCGTTTGATTGACCACCTTTATGAACCCACTTCCAGTCGTGTGATGCTGTTTGTCAATGGAAACCAACTCATTGTAA
TACTGAGTTTCCACGGACTCGTCTTGCTCCGAGCAATTAGTTTCCGGAAAAAAGCTACCACCCTGTGATTGAAGAGATCGGAGATTGTCAAGTTC
TGGAATAGGGAAATCTTCTAAAGGGGAATTGGGGATGACTGAATCAGGTTCGCTTCGATTTGGTTTGGCGAGTCTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390346] SGN-U577014 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191672 [Download][View] Facility Assigned ID: FA0AAD5BB02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5