EST details — SGN-E390268

Search information 
Request: 390268Match: SGN-E390268
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182805Clone name: TUS-40-I11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182805 is on microarray TOM1 spot ID 1-1-6.1.5.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C112383 [cTOA-16-B18] Trace: SGN-T126066 EST: SGN-E311957 Direction: 5' Facility: TIGR
Clone: SGN-C182805 [TUS-40-I11] Trace: SGN-T191595 EST: SGN-E390269 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390268Length: 709 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390268 [] (trimmed) CTAAAAGGATTGCTTGCTCAATTGCTAGTTAAAGTTGAATCCAAATGATCCATAAATTTACAACAGTAGGAAATACTTAAACTAATAACTGTTGT
TCTAAGCTTCTTCATACTTCATTTCTCATGAAAGAAAAAAATTGATGTTGCAGCAGCAACCTACCTCCCCCCCTCTCCAACAAGCACAAATGAAC
TCTAGTACTTACTAGTAAAAAGATGAAACCTTTGTGTCCGTGGCGTCGCCAAATCACACAAATGGGAAATACTTGTTCAAATTGAAAGGGAGGGA
GTAAAATTCCTCACTTCTCGTGTCAGTCTTGAAGGACTTGAATTTGTCCCACCAGTGCTTGCCTCTGTCCTTTCTTGTCAGGCCATCCTTTTTGT
GCATTGTGTTGTCCAGAAAAAAGGCAACGATACCCGCCACAAAAGCTTTTGATTGAAAGGGAACGTTGGCCATGTCGTTGAACCATCTTGCATGT
GTGTGAACAGGTCCATAACCAGCAACAGCAGTATACTCATTGAATTACTGTGGAATGGACAAGCCAAGAAAGACGGAGAAACCTAATATAAACTT
GGTGCGGAAACTATTAAGATTGCAAAACTGAAGAAAACCTAAGCCTCCAGCGCCTACTTAAGCGAAGAAAAGGCAATATAAGGCACCAACAATAG
GTGCAGGAATTGAAGCATAGACAGCTCCCAATTTCCCGAGAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390268] SGN-U564504 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191594 [Download][View] Facility Assigned ID: FA0AAD28AE06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0107 Quality Trim Threshold: 14.5