EST details — SGN-E390189

Search information 
Request: 390189Match: SGN-E390189
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183281Clone name: TUS-41-M7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183281 is on microarray TOM1 spot ID 1-1-2.1.3.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83662 [cLET-25-J24] Trace: SGN-T108431 EST: SGN-E295706 Direction: 5' Facility: TIGR
Clone: SGN-C183281 [TUS-41-M7] Trace: SGN-T191720 EST: SGN-E390394 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390189Length: 657 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390189 [] (trimmed) GGATGGGTTACTTTTTATTGGCATTGGAAGCACATCACATTATGGCAAGGTAACGTTTCACAGTTTAATGAATCTTCCACTTATTTGATGGGCTG
GTTAAGGGATTATTTATGGTTAAACTCTTCACAACTTATCAATGGATATAACCCTTTTGGTATGAATAGTTTATCGGTTTGGGCATGGATGTTCT
TATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCTTGGCGTGGATATTGGCAGGAATTGATTGAAACTTTAGCATGGGCTCAC
GAACGCACACCTTTGGCCAATTTGATTCGATGGAGAGATAAACCAGTGGCCCTTTCTATTGTACAAGCAAGATTGGTTGGATTAGCTCACTTTTC
TGTAGGTTATATATTCACTTATGCGGCTTTCTTGATTGCCTCTACGTCGGGCAAATTTGGTTAATTTCAACACCAAATTGAAAACATGGTGTTCC
TATTTCTCTCACTATTTTTGCTTTTCTCAGTAAAAACAAAAGCAAACACAGAGTATTATTTTTCGAACACCACCATCACCAGCACCAGCACCAGT
AACTCGATAAATGAAATTAAAAGTAGTTGTAATATTTACAGAGGCAAATGGGTTTATGATTCTTCATATCCACTCTATGATTTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390189] SGN-U573695 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191515 [Download][View] Facility Assigned ID: FA0AAD29AG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5