EST details — SGN-E390181

Search information 
Request: 390181Match: SGN-E390181
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183241Clone name: TUS-41-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183241 is on microarray TOM1 spot ID 1-1-2.3.3.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76424 [cLES-17-P24] Trace: SGN-T101340 EST: SGN-E288898 Direction: 5' Facility: TIGR
Clone: SGN-C183241 [TUS-41-K15] Trace: SGN-T1755 EST: SGN-E378448 Direction: 5' Facility: Giov. Lab
Clone: SGN-C183241 [TUS-41-K15] Trace: SGN-T191714 EST: SGN-E390388 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390181Length: 470 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390181 [] (trimmed) TATACCCATAAACCCTCAAAACCCTCAAAACTCTCAAAAACTTCATCAATGGCCTCCAAAATCACCAAATCCATTTCTAGAACCCTCTACACTTA
TCGTTTTTCTACTCGTTTCATCTCCTCCGCTTCATCGCCGTCGATTACTCAACCGCCGTCACTTCCTGCCGTCGGATCTTCACCTCAGCCGTCAT
TTCTGCTCTCACACTCCCTTCTACCTACCAACCCTAATGGCCTCAAGCCGTTTAGCCTCAATACGGTACGGTTCAGAGTTAACCGGTCCGGTAGC
TCTCCTTACACTCCAGGAACCGGGGACCGAGCTCCGACTGAGATGGCACCACTGTTTCCGGGATGCGATTACGAGCACTGGCTCATTGTTATGGA
TAAGCCTGGTGGAGAAGGAGCTCATAAACAGCAGATGATTGATTGTTATGTCCAAACCCTTGCTAAAGTCCTCGGGAGTGAATAGGAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390181] SGN-U569520 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191507 [Download][View] Facility Assigned ID: FA0AAD29AF08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0009 Quality Trim Threshold: 14.5