EST details — SGN-E389889
| Search information |
| Request: 389889 | Match: SGN-E389889 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169053 | Clone name: TUS-4-L11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24651 [cLED-9-C19] | Trace: SGN-T51047 | EST: SGN-E233486 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E389889 | Length: 715 bp (811 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E389889 [] (trimmed)
TTCAGAGCTACGAATTCAACGATTTCCTTCATAGATCTCAGATTATTCGTAACAAAGGGGATGTGTTTTGTAAGTTGATGCCTAAGGAGAAACAT
TTTTCTGAGGGGTTATACACATTTGACATTGGACAAAATGATTTAACTGCTGGTTACTTCAGTAACATGTCCACTGATCAAGTTAGAGCTTATGT
TCCTGATGTGATCGATCAATTCAAAACCGTTATTCAGGGTATATATAGTCGCGGTGGTAGATATTTTTGGATACATAACACAGGTCCAGTTGGTT
GTCTACCATACGTATTGGATCGTCTGTTAATAACAGCAGGGCAAGTTGATAAAGCAGGTTGTGCTGCTCCTTTCAATGAAGTGGCTCAATATTTC
AATGCTAAGTTGAAAGAAGCAGTGATTGAGCTAAGAAAAGATCTTCCATTAGCTGCTCTTACCTATGTTGATGTCTATTCAGTCAAGTATGAACT
CATCTATCACGCTAACAAGCACGGATTTGAGCATCCATTACAAGCTTGTTGTGGGCATGGAGGAAAGTACAACTACCACATAAATCATGGATGTG
GAAGCAAGATAAAGGTGAAAGGAAAAGAAATAATATTGGGAAAATCATGCAAAAGTCCATCAAAAAGAATAAATTGGGATGGTGTACATTTCACA
GAGGCTGCTAATAAATGGGTGTTTTCACAAATTGTGAAATGGTTATATTC
TTTTCTGAGGGGTTATACACATTTGACATTGGACAAAATGATTTAACTGCTGGTTACTTCAGTAACATGTCCACTGATCAAGTTAGAGCTTATGT
TCCTGATGTGATCGATCAATTCAAAACCGTTATTCAGGGTATATATAGTCGCGGTGGTAGATATTTTTGGATACATAACACAGGTCCAGTTGGTT
GTCTACCATACGTATTGGATCGTCTGTTAATAACAGCAGGGCAAGTTGATAAAGCAGGTTGTGCTGCTCCTTTCAATGAAGTGGCTCAATATTTC
AATGCTAAGTTGAAAGAAGCAGTGATTGAGCTAAGAAAAGATCTTCCATTAGCTGCTCTTACCTATGTTGATGTCTATTCAGTCAAGTATGAACT
CATCTATCACGCTAACAAGCACGGATTTGAGCATCCATTACAAGCTTGTTGTGGGCATGGAGGAAAGTACAACTACCACATAAATCATGGATGTG
GAAGCAAGATAAAGGTGAAAGGAAAAGAAATAATATTGGGAAAATCATGCAAAAGTCCATCAAAAAGAATAAATTGGGATGGTGTACATTTCACA
GAGGCTGCTAATAAATGGGTGTTTTCACAAATTGTGAAATGGTTATATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389889] | SGN-U583252 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191215 [Download][View] | Facility Assigned ID: TUS04-L11.T3 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 14.5 |
Working
