EST details — SGN-E379897
| Search information |
| Request: 379897 | Match: SGN-E379897 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168671 | Clone name: TUS-3-L13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C7599 [cLEC-39-I24] | Trace: SGN-T31940 | EST: SGN-E208650 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C168671 [TUS-3-L13] | Trace: SGN-T746 | EST: SGN-E379958 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379897 | Length: 789 bp (792 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379897 [] (trimmed)
TTTATTTTTGATTATTGACAGGTTACTCATCAAAATGTATTTACGTCTAGAGTCAAGTAAATAGGTATTCAAGGTTGTCAATAGTTTCAAAGATT
AAATTAATAATTTAATAATTATTTTGAACCAAATAAATTAAAATTAGAATTGAGAATCGGTGAGTTTGTAATTAGCTTGAAAATATGAGTATTTC
CTCTTCTATTAGCTATTATTAAAATTAAAAGTCATGAAAAACAATATTTTCAGCTTAAAAGAATAAATGAAATAGCTTTTATTTACTAATAATTA
ATTAACTTCTAATCCATACAAGACGCCAGCATGTCTTTCTGCTCCGTTATTCACAAAATAAATATCCCTCATTTTCTGAAACGCATGCCACGTCA
GCAAGCTATCTGAACCGGCCTGGTGACATTTTCCGACCGCCCGGTCCACGGACAATGTCTTCGCAAGCCGGTCTAAACCACCATAAAGGCTATTA
CAGAATCTCATCAAATGCTTCATATCATAAACTTTATTTCCAAAAAACACCCTCACGACTTCCATAAACTCCTCTAATCCACCGGGGAGTTCCCG
GCGCGTGAGTATCTTCACCAGGTAACCGAAATCATACGCGCTGTGAAACGTAACCCAACTCACCGATTCATTACAAACCAAACCGGACGACATCA
TCAGTTCAGTGAACCGGGCTGAGTTGATCCCGCATTCCCGGTTCATTTCAAAGTCGATCCCCTGTCGGCGGAGTAACTCGATGGAATCCGGAGCG
TAGAGATCACGCTCCACATCGAAATCGGG
AAATTAATAATTTAATAATTATTTTGAACCAAATAAATTAAAATTAGAATTGAGAATCGGTGAGTTTGTAATTAGCTTGAAAATATGAGTATTTC
CTCTTCTATTAGCTATTATTAAAATTAAAAGTCATGAAAAACAATATTTTCAGCTTAAAAGAATAAATGAAATAGCTTTTATTTACTAATAATTA
ATTAACTTCTAATCCATACAAGACGCCAGCATGTCTTTCTGCTCCGTTATTCACAAAATAAATATCCCTCATTTTCTGAAACGCATGCCACGTCA
GCAAGCTATCTGAACCGGCCTGGTGACATTTTCCGACCGCCCGGTCCACGGACAATGTCTTCGCAAGCCGGTCTAAACCACCATAAAGGCTATTA
CAGAATCTCATCAAATGCTTCATATCATAAACTTTATTTCCAAAAAACACCCTCACGACTTCCATAAACTCCTCTAATCCACCGGGGAGTTCCCG
GCGCGTGAGTATCTTCACCAGGTAACCGAAATCATACGCGCTGTGAAACGTAACCCAACTCACCGATTCATTACAAACCAAACCGGACGACATCA
TCAGTTCAGTGAACCGGGCTGAGTTGATCCCGCATTCCCGGTTCATTTCAAAGTCGATCCCCTGTCGGCGGAGTAACTCGATGGAATCCGGAGCG
TAGAGATCACGCTCCACATCGAAATCGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379897] | SGN-U578982 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1056 [Download][View] | Facility Assigned ID: 241_D01_TUS03L13.Td_012.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0017 | Quality Trim Threshold: 20.5 |
Working
