EST details — SGN-E379620
| Search information |
| Request: 379620 | Match: SGN-E379620 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167967 | Clone name: TUS-1-O5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C167967 [TUS-1-O5] | Trace: SGN-T543 | EST: SGN-E379199 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379620 | Length: 765 bp (788 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379620 [] (trimmed)
GCGGCCGCTCTAAATTAGTGGATCGAACGGGCTGCAGGAATTCTCCACGAGGAGAGATATACTCATCAATATTTTTCTCACACCTGCACACACCA
CACACTTAAAAATTAAAAATATTTCAAAATATTTCTTTTGATTTTCTTTTTTTCTTCTTCTTCTTCTTCCCCATTTCTGTAATCATCCCGCTTCT
TTGATCCCTTTCTGTAAACTATCTGTGTTTTTTCAAGAAGTTTTTCTGACTTTTGAGTTTGTGATTTTCATGTTTTTGAACTTAAAAATGGAGAA
AATGCAAACTTTTAATTAGAGGAAAAAGATTTTTTTTACAAACTCAGGTGTTTTCAGAATCGAGATCTAGTAAAGTATAACTCAGTATAGTTCCT
TTTTTTTTCTTTTTATGCATAATCAGATTAGAGGGCTTTATTAGTTGTCCCCTATAGTTTGATTTGTTTTTAAAGGAGAAAAATAGAGGTTGTTA
TTTGAAGACCTCTGTTTTTTTTTCTTCTGTTTATAGTGAAATCACTTACCTGTGTTCTTTTTATTTGATAAGAAACAGGTTGTGTGAATTTTTAT
TTTTTTTTCGTTGTTTAGATATGGCAGCTATGGATTTTTGGAATAGTACATGTGTAGATTTTGAATTATCATCAGAACCTGTTACTTCTGGTGGT
GAATTAATGGAAGCTCTTGAACCTTTTATGAAAAGTGCTTCTTCTTCTCCTTCTCCTCCACCTTCTACTTTTCCTCCTGTTTTCCCTTCTTCTTC
TTCTT
CACACTTAAAAATTAAAAATATTTCAAAATATTTCTTTTGATTTTCTTTTTTTCTTCTTCTTCTTCTTCCCCATTTCTGTAATCATCCCGCTTCT
TTGATCCCTTTCTGTAAACTATCTGTGTTTTTTCAAGAAGTTTTTCTGACTTTTGAGTTTGTGATTTTCATGTTTTTGAACTTAAAAATGGAGAA
AATGCAAACTTTTAATTAGAGGAAAAAGATTTTTTTTACAAACTCAGGTGTTTTCAGAATCGAGATCTAGTAAAGTATAACTCAGTATAGTTCCT
TTTTTTTTCTTTTTATGCATAATCAGATTAGAGGGCTTTATTAGTTGTCCCCTATAGTTTGATTTGTTTTTAAAGGAGAAAAATAGAGGTTGTTA
TTTGAAGACCTCTGTTTTTTTTTCTTCTGTTTATAGTGAAATCACTTACCTGTGTTCTTTTTATTTGATAAGAAACAGGTTGTGTGAATTTTTAT
TTTTTTTTCGTTGTTTAGATATGGCAGCTATGGATTTTTGGAATAGTACATGTGTAGATTTTGAATTATCATCAGAACCTGTTACTTCTGGTGGT
GAATTAATGGAAGCTCTTGAACCTTTTATGAAAAGTGCTTCTTCTTCTCCTTCTCCTCCACCTTCTACTTTTCCTCCTGTTTTCCCTTCTTCTTC
TTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379620] | SGN-U579555 | Tomato 200607 | Build 2 | 111 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69 [Download][View] | Facility Assigned ID: 222_G05_TUS01O5.T3_021.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.906 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |
Working
