EST details — SGN-E378748
| Search information |
| Request: 378748 | Match: SGN-E378748 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174873 | Clone name: TUS-19-N23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174873 is on microarray TOM1 spot ID 1-1-2.2.15.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C23694 [cLED-6-B23] | Trace: SGN-T49970 | EST: SGN-E232984 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C174873 [TUS-19-N23] | Trace: SGN-T189525 | EST: SGN-E376911 | Direction: 3' | Facility: INRA |
| Clone: SGN-C174873 [TUS-19-N23] | Trace: SGN-T189526 | EST: SGN-E376912 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378748 | Length: 616 bp (1108 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378748 [] (trimmed)
CTGTGTTCCCTTAGCTTTGTCATCAACATTTTCTTCAGATCTTCTCCTTCCTTCTGATGAAGTAGTTCCTAATGGTAAAACATATGCTTCAGTAG
TTGACAGTGATGGAAATCCAGTAAAAGCAGGTGCAAAATACTTTGTGTTACCATCTTTAAGGGGTAGTGGAGGTGGTCTTGTTTTGTCTAGAGTT
GTTGACAAAAATGTTAAAGTTTGTCCACAAGACATTGTCCAAGAACCTCAGGAACTTAACACTGGACGTCCTGTGGAGTTCTTTCCAGCATACCC
TAATAAAACTGGTGAAATTATTAAAGTTAACAACCCCATAAATGTTAACTTCTTTTCACTTAGTAAGACATCACGTTGTGCTAATTTTACTGTAT
GGAAAATGGACAAGAAATATAAATATGTGGTAGGTAGAGGGACTCTAGGGGCGCTGAATCGCATAAGGAATTGGTTCAGGATTGTGCCATATGGA
AAGGGCTATAGGTTTGTATATTGTCCTTCACTCTGTGTTCCTTGCAAAATTAGGTGCTTTGACTTATTCATTTCTTATGAGGAACGCGGAAATGT
TTTCAGTAGACGCTTGGCTGCCTCGGACAATGAATTGCCATTTTCT
TTGACAGTGATGGAAATCCAGTAAAAGCAGGTGCAAAATACTTTGTGTTACCATCTTTAAGGGGTAGTGGAGGTGGTCTTGTTTTGTCTAGAGTT
GTTGACAAAAATGTTAAAGTTTGTCCACAAGACATTGTCCAAGAACCTCAGGAACTTAACACTGGACGTCCTGTGGAGTTCTTTCCAGCATACCC
TAATAAAACTGGTGAAATTATTAAAGTTAACAACCCCATAAATGTTAACTTCTTTTCACTTAGTAAGACATCACGTTGTGCTAATTTTACTGTAT
GGAAAATGGACAAGAAATATAAATATGTGGTAGGTAGAGGGACTCTAGGGGCGCTGAATCGCATAAGGAATTGGTTCAGGATTGTGCCATATGGA
AAGGGCTATAGGTTTGTATATTGTCCTTCACTCTGTGTTCCTTGCAAAATTAGGTGCTTTGACTTATTCATTTCTTATGAGGAACGCGGAAATGT
TTTCAGTAGACGCTTGGCTGCCTCGGACAATGAATTGCCATTTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378748] | SGN-U573941 | Tomato 200607 | Build 2 | 98 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1328 [Download][View] | Facility Assigned ID: TUS19N23.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
