EST details — SGN-E378674
| Search information |
| Request: 378674 | Match: SGN-E378674 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175348 | Clone name: TUS-21-B18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175348 is on microarray TOM1 spot ID 1-1-7.2.13.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24342 [cLED-7-O19] | Trace: SGN-T50495 | EST: SGN-E231986 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175348 [TUS-21-B18] | Trace: SGN-T190638 | EST: SGN-E378024 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378674 | Length: 514 bp (1220 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378674 [] (trimmed)
TTAGGTGGAAACCCTCTCTCTCTCAATTGTCAAACAATCAAATTCTGAGTTGTAAAGCTTCAGAAGTTATGGGAAAGGACTCCAAGTCTAAGGAT
TCTGGAAGCAAGGGAAAGGGTAAACAGGCTGCTGGTGGAAGTGAGGATAATGCTTCGAAAGGAAAAGGAAAAGGTGGGAAAGGAGATGGCCTTGG
AACCTGCACATATGTTAAAGCAAGGCATGTCTTATGTGAGAAGCAGTCAAAGATTAATGAAGCATACAAAATACTACAGGAAGGCTGGCTGAACA
ACGGAGATAAAGTTCCACCAGCTGAGTTTGCTAAGGTAGCTGCAACTTACTCGGAATGCCCCTCAGGAAAGAAAGGTGGGGACCTGGGATGGTTT
CCACGTGGCAAGATGGCAGGCCCATTTCAGGAAGTTGCCTTCAATACCCCTGGTGGAGCTACCAGTGCACCCTTTAAATCAACACATGGATACCA
TTTCATTTTATCTGAAGGGAGGAAGAACTGAAATCTCTG
TCTGGAAGCAAGGGAAAGGGTAAACAGGCTGCTGGTGGAAGTGAGGATAATGCTTCGAAAGGAAAAGGAAAAGGTGGGAAAGGAGATGGCCTTGG
AACCTGCACATATGTTAAAGCAAGGCATGTCTTATGTGAGAAGCAGTCAAAGATTAATGAAGCATACAAAATACTACAGGAAGGCTGGCTGAACA
ACGGAGATAAAGTTCCACCAGCTGAGTTTGCTAAGGTAGCTGCAACTTACTCGGAATGCCCCTCAGGAAAGAAAGGTGGGGACCTGGGATGGTTT
CCACGTGGCAAGATGGCAGGCCCATTTCAGGAAGTTGCCTTCAATACCCCTGGTGGAGCTACCAGTGCACCCTTTAAATCAACACATGGATACCA
TTTCATTTTATCTGAAGGGAGGAAGAACTGAAATCTCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378674] | SGN-U564374 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1366 [Download][View] | Facility Assigned ID: TUS21B18.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
