EST details — SGN-E378666
| Search information |
| Request: 378666 | Match: SGN-E378666 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174171 | Clone name: TUS-18-A17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174171 is on microarray TOM1 spot ID 1-1-8.1.16.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C7160 [cLEC-38-A12] | Trace: SGN-T31658 | EST: SGN-E209123 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C174171 [TUS-18-A17] | Trace: SGN-T197179 | EST: SGN-E395853 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378666 | Length: 826 bp (1159 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378666 [] (trimmed)
CAAGGATGTTACAAGTAAGCAATTGGAGCAGTGCAGAGAACCTTCTAAACCGGTAAAAAGACGTCGAGTGCTACAATTTGATGCTGAGATCCTGG
ATTCCACTGGTTCAAATGAAAAGCTTGCATTAACTTTCTTAAAATCTAAGGAGAGGAATGCCTATTTTGAAGAAGCTAGGAGTGATGTGTCAGAC
TGGTTTTCCGAATATGCAGATGGTGCAACATCTTCGGCTCAGGAAGGTTTTGATGAGTCATCTGAAGAATGGCTTACTGATTGCATTAATGATCC
TGAGTTGCAGATTATTTCCGAGGATATGAATGCATCTGGAGTATCTGATATTCAAGCAGACACAATGGAAGTTGTCAATTCCCCACCAGAATGCG
AGATAACTATGGTTAAAAGCAGTCCTGCTCGTACTTATGGGAACATTGTTTTCAAAGGTAGGAGTTCATACACAAAGACTCCCAAGAAAGGTGCA
TCTTCTGTAGTTTACCCGTTTGGATTTATCAAACCCTGCAGCGCTCAAGGAGATGTGACTTTAAAAGAGATCAACAAAAAGATACGTACTCCGCC
ACCATCTAAATCAAAGCAACACAATCAAGATTCACCACCTTATCCAACATCAGCTTTTTCCGGGAAGCCTGTCATTGGCAAGACAAAAATTCACA
CAGAGGGCGGAAGAGGCAGCATTACCATCATGAGAACTAAAGGGTAATCTCTTGAAATTTTTTTTTCTTTTGGGACAAACTTTAGCATGGGACTG
CTCCAAATTCCTTTGACAGAGCAATTTTATGGTACTGTTTTTAGGTCTTCAGCACATAAGTTGAAT
ATTCCACTGGTTCAAATGAAAAGCTTGCATTAACTTTCTTAAAATCTAAGGAGAGGAATGCCTATTTTGAAGAAGCTAGGAGTGATGTGTCAGAC
TGGTTTTCCGAATATGCAGATGGTGCAACATCTTCGGCTCAGGAAGGTTTTGATGAGTCATCTGAAGAATGGCTTACTGATTGCATTAATGATCC
TGAGTTGCAGATTATTTCCGAGGATATGAATGCATCTGGAGTATCTGATATTCAAGCAGACACAATGGAAGTTGTCAATTCCCCACCAGAATGCG
AGATAACTATGGTTAAAAGCAGTCCTGCTCGTACTTATGGGAACATTGTTTTCAAAGGTAGGAGTTCATACACAAAGACTCCCAAGAAAGGTGCA
TCTTCTGTAGTTTACCCGTTTGGATTTATCAAACCCTGCAGCGCTCAAGGAGATGTGACTTTAAAAGAGATCAACAAAAAGATACGTACTCCGCC
ACCATCTAAATCAAAGCAACACAATCAAGATTCACCACCTTATCCAACATCAGCTTTTTCCGGGAAGCCTGTCATTGGCAAGACAAAAATTCACA
CAGAGGGCGGAAGAGGCAGCATTACCATCATGAGAACTAAAGGGTAATCTCTTGAAATTTTTTTTTCTTTTGGGACAAACTTTAGCATGGGACTG
CTCCAAATTCCTTTGACAGAGCAATTTTATGGTACTGTTTTTAGGTCTTCAGCACATAAGTTGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378666] | SGN-U572339 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1305 [Download][View] | Facility Assigned ID: TUS18A17.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0143 | Quality Trim Threshold: 14.5 |
Working
