EST details — SGN-E378647
| Search information |
| Request: 378647 | Match: SGN-E378647 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185250 | Clone name: TUS-46-O8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185250 is on microarray TOM1 spot ID 1-1-1.3.12.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46076 [cLEI-11-C24] | Trace: SGN-T81983 | EST: SGN-E265828 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378647 | Length: 312 bp (1087 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378647 [] (trimmed)
TATGGCACCCCTAAGGTGGTTAACTTCGGAGTTACAATTGCTCGTGCCATCGAGCTACCTGATGCTATGGAGAATGCTGGGGCTGCCCTTATCAG
GGAGGTTGCAAGCAAAACCAATGATTCAGCTGGTGATGGAACAACAACTGCATCTGTTCTTGCTCGGGAAATCATTAAACTCGGTCTGTTGAGTG
TTACATCTGGTGCAAATCAGTGTCTTTAAAGAGGGGCATTGACAAACTGTACTGGGTTTGATGAAGAGCTAGAAAAGAAGCTAGACCTGTTAAAG
GCCTGAGACATCAAAGTATTGCTCAAT
GGAGGTTGCAAGCAAAACCAATGATTCAGCTGGTGATGGAACAACAACTGCATCTGTTCTTGCTCGGGAAATCATTAAACTCGGTCTGTTGAGTG
TTACATCTGGTGCAAATCAGTGTCTTTAAAGAGGGGCATTGACAAACTGTACTGGGTTTGATGAAGAGCTAGAAAAGAAGCTAGACCTGTTAAAG
GCCTGAGACATCAAAGTATTGCTCAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378647] | SGN-U579512 | Tomato 200607 | Build 2 | 185 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1885 [Download][View] | Facility Assigned ID: TUS46O8.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 20.5 |
Working
