EST details — SGN-E378605

Search information 
Request: 378605Match: SGN-E378605
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182460Clone name: TUS-39-K2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182460 is on microarray TOM1 spot ID 1-1-7.3.8.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3830 [cLEC-22-E16] Trace: SGN-T28132 EST: SGN-E203968 Direction: 5' Facility: TIGR
Clone: SGN-C182460 [TUS-39-K2] Trace: SGN-T194886 EST: SGN-E393560 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E378605Length: 378 bp (1145 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E378605 [] (trimmed) TAGAGAACAAGATCAACAGGCAAGTGACCTTTGCTAAGAGAAGAAATGGGCTTTTGAAGAAAGCTTATGAGCTTTCAGTTCTTTGTGATGCTGAG
GTTGCTCTAATCATCTTCTCTAATAGGGGAAAACTCTATGAGTTCTGCAGTAGTTCTAGCATGCTAAAGACGTTGGAGAGGTACCAGAAGTGCAA
CTATGGAGCACCTGAACCGAATATATCAACACGAGAAGCACTGGAAATTAGTAGCCAGCAGGAGTACTTGAAGCTTAAAGGACGTTACGAAGCAT
TGCAGCGATCACAGAGGAATCTTCTTGGTGAAGATCTTGGTCCTTTGAACAGCNAAGAACTTGAATCACTTGAGAGACAACTTGATATGTCGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378605] SGN-U577553 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1725 [Download][View] Facility Assigned ID: TUS39K2.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0183 Quality Trim Threshold: 14.5