EST details — SGN-E378595

Search information 
Request: 378595Match: SGN-E378595
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181843Clone name: TUS-38-A9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181843 is on microarray TOM1 spot ID 1-1-8.1.10.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2972 [cLEC-18-A5] Trace: SGN-T27380 EST: SGN-E201874 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378595Length: 549 bp (1203 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E378595 [] (trimmed) CTGCGGTCGAGGAGAGAGACTCAGAAGTTCTTTCCGGTGACGGACTTGATTAATCCTACAATTCATCATTACAATCCCTTCTTCTCTCCTGAATC
GACTTACCTCGGTTATCACAGATACCGAGGCGAATCGTGTTCAGGGGAAACAACGATTCCTTACTTGGACTCTGTAATTTCTCCGGTTAACGGAC
TGAAAATGCTGAGGCTTAACGGATTCTTCCCTGCATCCTCTCCGTCTGGTGAATTCATTGCATTCAATCCAGGATTCAAAGGACTAGAAATCGTC
AAATCGGATGGATCGAAAAAATGGACATTGATTAAAGATCGTACATCTTTCTGCAATTCATGGTCTCCAGCTGAACCTCATGTGATATATACATC
AATCGGACCTATATTCGAATCAGTTAAAACAACTGTACAAATAGCACGCGTTTCGTTCAGCTCATTGAAACGTTACAGCGATGAAATTCCGGTAG
AGATAAAAGTTTTGACAGGGGAAGAGACTGGGTACAATGCATTTCCTTCTTGCTCCCCTGATGGAAAGCATCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378595] SGN-U584580 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1692 [Download][View] Facility Assigned ID: TUS38A9.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0107 Quality Trim Threshold: 14.5