EST details — SGN-E378545
| Search information |
| Request: 378545 | Match: SGN-E378545 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C178550 | Clone name: TUS-29-H4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178550 is on microarray TOM1 spot ID 1-1-5.4.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E378545 | Length: 884 bp (1197 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378545 [] (trimmed)
CGAAAATGAAGTTGAACTCATATTCTTGGACCAAGGTGGCAAACATAATATTTATAGATCAACCTGCTGGCACAGGCTACTCATATGCAAACACT
TCAGAAGCTTACAACTGCAATGACACCCTCTCTGTAACTCTAACTTATGACTTCCTTAGAAAGTGGCTTATGGATCATCCCGAGTATCTCAACAA
TCCACTATATGTTGGTGGTGATTCCTACTCAGGCATTTTTGTTGCACTGCTTACTCGCAAAATATACGATGGTATTGAAGTTGGTGACAGGCCTC
GAGTTAATATCAAAGGATATATACAAGGCAATGCTCTAACAGATAGATCCATCGACTTCAATGGTAGAGTCAAATATGCTAATCATATGGGACTT
ATTTCAGATAAGATCTATCAGTCGGCGAAAGCAAATTGCAATGGGAATTACATTGACGTTGATCCAAATAACATATTATGCCTAAATGATCTTCA
AAAAGCAACAAGGTGTCTCAAGAACATACGACGGGCGCAAATTTTAGAGCCTTACTGTGACCTTCCATATTTAATGGGTATTCTCCAAGAAACTC
CTACAAATGGCCAGTCAGTATTTCCAATTGCAGGACCATGGTGTCGAGAAAAGAATTACATATACTCCTATGTTTGGGCAAATGATAAAGCTGTC
CAAAAAGCACTAAACGTTCGTGAGGGAACAACATTGGAGTGGGTGAGATGCAATGAAAGCATGCATTATAGAGGTAAGGAGAGAACTGAGTCATA
TGTGTATGATTGGGAGCCTTGGTTTGTTGACGGTCAAGTAGCAGGATACNAAGTGAAGTATTTACAAAATGATTATGAAATGACATATGCAACTG
TTAAGGGTGCGGGGCATACAGCTCCTGAA
TCAGAAGCTTACAACTGCAATGACACCCTCTCTGTAACTCTAACTTATGACTTCCTTAGAAAGTGGCTTATGGATCATCCCGAGTATCTCAACAA
TCCACTATATGTTGGTGGTGATTCCTACTCAGGCATTTTTGTTGCACTGCTTACTCGCAAAATATACGATGGTATTGAAGTTGGTGACAGGCCTC
GAGTTAATATCAAAGGATATATACAAGGCAATGCTCTAACAGATAGATCCATCGACTTCAATGGTAGAGTCAAATATGCTAATCATATGGGACTT
ATTTCAGATAAGATCTATCAGTCGGCGAAAGCAAATTGCAATGGGAATTACATTGACGTTGATCCAAATAACATATTATGCCTAAATGATCTTCA
AAAAGCAACAAGGTGTCTCAAGAACATACGACGGGCGCAAATTTTAGAGCCTTACTGTGACCTTCCATATTTAATGGGTATTCTCCAAGAAACTC
CTACAAATGGCCAGTCAGTATTTCCAATTGCAGGACCATGGTGTCGAGAAAAGAATTACATATACTCCTATGTTTGGGCAAATGATAAAGCTGTC
CAAAAAGCACTAAACGTTCGTGAGGGAACAACATTGGAGTGGGTGAGATGCAATGAAAGCATGCATTATAGAGGTAAGGAGAGAACTGAGTCATA
TGTGTATGATTGGGAGCCTTGGTTTGTTGACGGTCAAGTAGCAGGATACNAAGTGAAGTATTTACAAAATGATTATGAAATGACATATGCAACTG
TTAAGGGTGCGGGGCATACAGCTCCTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378545] | SGN-U580963 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1500 [Download][View] | Facility Assigned ID: TUS29H4.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
