EST details — SGN-E378540

Search information 
Request: 378540Match: SGN-E378540
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177996Clone name: TUS-28-A2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177996 is on microarray TOM1 spot ID 1-1-7.1.4.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64388 [cLEM-6-A1] Trace: SGN-T84365 EST: SGN-E270609 Direction: 5' Facility: TIGR
Clone: SGN-C177996 [TUS-28-A2] Trace: SGN-T183333 EST: SGN-E370143 Direction: 5' Facility: INRA
Clone: SGN-C177996 [TUS-28-A2] Trace: SGN-T183395 EST: SGN-E370205 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378540Length: 442 bp (1147 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378540 [] (trimmed) GCGAGAACACATAGGCCAAGTCAAGCGATAGAGAGAGAGATTTTCCTGATATGACATCTGTTCAACCTTCCGTGTCTGTCAATGATGATAACAAC
TTTATTGAAGCTAAAGAAACTAAAAAGAGCCGCAAAAGATCTGCAAAATCTAAGGGAGCAGGAGCAAAGGCCTCAATGCCCACAGCTGCTTCCGA
GGTGTCTGTTGCATCAAGTCCTATTGACAAAGTCAAAAGCTTGCGTCAGGTACAACCTGACCAGGAAGTATTACCTGCTATACCATCTGGTCCTT
CGCTAGGAGATTTTGTTGTTTGGAAGGGTGAATCTGCAAGTTCTGCTACTATTCCTGTTCCAGCATGGTCCACCGACTCTGGGGAACCCTCAAAC
CCACATCCTTGCGGGACATCCTAAAGGACCAGAAAAGAAGGTTACTTCTGGACAGCAGCATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378540] SGN-U574114 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1476 [Download][View] Facility Assigned ID: TUS28A2.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5