EST details — SGN-E378539

Search information 
Request: 378539Match: SGN-E378539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177846Clone name: TUS-27-J20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177846 is on microarray TOM1 spot ID 1-1-5.2.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64119 [cLEM-5-C7] Trace: SGN-T85145 EST: SGN-E271340 Direction: 5' Facility: TIGR
Clone: SGN-C177846 [TUS-27-J20] Trace: SGN-T193032 EST: SGN-E391706 Direction: 5' Facility: INRA
Clone: SGN-C177846 [TUS-27-J20] Trace: SGN-T193281 EST: SGN-E391955 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378539Length: 459 bp (1323 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378539 [] (trimmed) CGCTTAACTGTCCTAATTTTAGACTGTCTGAAACTGTATTCACTTTCATTTAAGATGTGGGTTATCATAAAAACAGCCGCAGCGTACTGGTTGAA
GCCGATCCCACCGAATCCACCGCCAACAGATCGGGGGGGTCGGATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCC
TCGAACAAGCTAAGAAACTATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGGAAATCACTCACAAATTCAAGGGAAACACTGATAT
GAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAGATGGGTTGATGAAGTTATTCCAGATGCCCCTTGGGTTGTAACCCCCGAGTTCATTG
AGAAACATCGGGATTGACTATGGGGCACATGACGCTCTTCCTTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378539] SGN-U568335 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1473 [Download][View] Facility Assigned ID: TUS27J20.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0149 Quality Trim Threshold: 20.5