EST details — SGN-E378429
| Search information |
| Request: 378429 | Match: SGN-E378429 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C180952 | Clone name: TUS-35-L6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180952 is on microarray TOM1 spot ID 1-1-3.4.17.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C1644 [cLEC-13-G9] | Trace: SGN-T25906 | EST: SGN-E204153 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378429 | Length: 902 bp (1128 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378429 [] (trimmed)
TGCATGAATTCGGAACGAGGATCAGATTCAGACTATTTGGTTGGTTTGACAAAATTTGCTGATATGAGCAATGAAGAGTTTAGACAAGTTCATAC
TTCCAAGATTAAGATACCCTTTAACAAGAGAAAGACTATTCGGATGAAGGTAGCGGAAAAAGAAACAACTTCATTTTCTTGTGATGCTCCTCCTT
CAATGGACTGGAGGAAACATGGGGCTGTCACTAAGGTGAAGGACCAAGGACAATGTGGAGCTTGTTGGGCATTCTCGGCGTCTGGAGCCATGGAG
GGAATAAATGCAATAGTTGCTGGTGAACTTATTAGCCTTTCTGAACAAGAACTTATTGATTGTGATACTTCAAACAATAGTGGCTGTAAAGGTGG
ACTTATGGACCCTGCTTTTGAATGGGTGATAAACAACGGCGGCATTGATTCAGCAGCTGATTATGCATACACTGCCCATTCTCAAGGCCATTGCA
ATTACAACAAGGTGAACCATAAGGTTGTAACAATTGATGGATACCGAGATGTTGCGGAGGAGGAAAGTGCACTTCTTTGTGCTGCTGCTCAACAA
CCTGTTAGTGTGGCCATCGACGGAAGCAGCCCTGATTTTCAACTATACCTAGGGGGAATATATGATGGAGAATGCTCTGATGATCCAAATAAGGT
CTCCCACGGAGTAGTAATAGTTGGATATGATTCTGATGGATATGATGACTATTGGATTATCAAGAACTCATGGGGTACAGAGTGGGGAATGGAAG
GGTATGGATATATAAGAAGGAACACTAATTTGCCATATGGGGTTTGTGCCATTAATTCATTGGGCTCATACCCAACGAAAGAATCATCACCATCT
CCTTATCCGTCTCCAGGCATGCCACCACCTCCCCCGGCATCCCCCTC
TTCCAAGATTAAGATACCCTTTAACAAGAGAAAGACTATTCGGATGAAGGTAGCGGAAAAAGAAACAACTTCATTTTCTTGTGATGCTCCTCCTT
CAATGGACTGGAGGAAACATGGGGCTGTCACTAAGGTGAAGGACCAAGGACAATGTGGAGCTTGTTGGGCATTCTCGGCGTCTGGAGCCATGGAG
GGAATAAATGCAATAGTTGCTGGTGAACTTATTAGCCTTTCTGAACAAGAACTTATTGATTGTGATACTTCAAACAATAGTGGCTGTAAAGGTGG
ACTTATGGACCCTGCTTTTGAATGGGTGATAAACAACGGCGGCATTGATTCAGCAGCTGATTATGCATACACTGCCCATTCTCAAGGCCATTGCA
ATTACAACAAGGTGAACCATAAGGTTGTAACAATTGATGGATACCGAGATGTTGCGGAGGAGGAAAGTGCACTTCTTTGTGCTGCTGCTCAACAA
CCTGTTAGTGTGGCCATCGACGGAAGCAGCCCTGATTTTCAACTATACCTAGGGGGAATATATGATGGAGAATGCTCTGATGATCCAAATAAGGT
CTCCCACGGAGTAGTAATAGTTGGATATGATTCTGATGGATATGATGACTATTGGATTATCAAGAACTCATGGGGTACAGAGTGGGGAATGGAAG
GGTATGGATATATAAGAAGGAACACTAATTTGCCATATGGGGTTTGTGCCATTAATTCATTGGGCTCATACCCAACGAAAGAATCATCACCATCT
CCTTATCCGTCTCCAGGCATGCCACCACCTCCCCCGGCATCCCCCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378429] | SGN-U580336 | Tomato 200607 | Build 2 | 79 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1657 [Download][View] | Facility Assigned ID: TUS35L6.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
