EST details — SGN-E378302
| Search information |
| Request: 378302 | Match: SGN-E378302 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181841 | Clone name: TUS-38-A7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181841 is on microarray TOM1 spot ID 1-1-2.1.10.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C2922 [cLEC-17-M10] | Trace: SGN-T27176 | EST: SGN-E203760 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181841 [TUS-38-A7] | Trace: SGN-T194642 | EST: SGN-E393316 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181841 [TUS-38-A7] | Trace: SGN-T199334 | EST: SGN-E398008 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378302 | Length: 521 bp (1174 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378302 [] (trimmed)
CAAACACAACATTCTCAAAAAATTCATAATTAAAATGGAAACAAAGAAATGCATATAAACACTTTGCTTCTCTCTATTTTCCTACTTTTCAGTGT
GATTGTGGCCGGAAACCCAGAAAACTCCGGCGACTCTGTAAACCCTTTTACACCAAAAGCTTATTCAATTCGTTACTGGAACAAACGAATTTCAA
ATAAATTACCCAAACCATGGTTTCTTCTGAACAAAGCTTCACCATTAAATGCTGCACAATTTGCAAAATACTCAAAGCTAGCAACAGGGGATCAA
GAATCTCTGTCAAATGAAATTCAATCATTTTGCTCCTCTGCAAATCTGCTCTGTTTTCCTGATATTTCAACAAGTTTAGATAAACATGGCCAAGA
TACCCAATTTTCTTCATATATGAGCAAAAATTTCACCAATTATGGCAATAAATTGCCTCGTGGGATTGATAGTTTCAAAAAATACGCCGAAAATG
ATAACCTCCCTGTTTATTTCTTTCCGGCAATATAGGCCGCGGGGGC
GATTGTGGCCGGAAACCCAGAAAACTCCGGCGACTCTGTAAACCCTTTTACACCAAAAGCTTATTCAATTCGTTACTGGAACAAACGAATTTCAA
ATAAATTACCCAAACCATGGTTTCTTCTGAACAAAGCTTCACCATTAAATGCTGCACAATTTGCAAAATACTCAAAGCTAGCAACAGGGGATCAA
GAATCTCTGTCAAATGAAATTCAATCATTTTGCTCCTCTGCAAATCTGCTCTGTTTTCCTGATATTTCAACAAGTTTAGATAAACATGGCCAAGA
TACCCAATTTTCTTCATATATGAGCAAAAATTTCACCAATTATGGCAATAAATTGCCTCGTGGGATTGATAGTTTCAAAAAATACGCCGAAAATG
ATAACCTCCCTGTTTATTTCTTTCCGGCAATATAGGCCGCGGGGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378302] | SGN-U581965 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1691 [Download][View] | Facility Assigned ID: TUS38A7.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.930 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 20.5 |
Working
