EST details — SGN-E378133

Search information 
Request: 378133Match: SGN-E378133
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175622Clone name: TUS-21-N4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175622 is on microarray TOM1 spot ID 1-1-5.2.13.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15622 [cLED-13-H22] Trace: SGN-T51918 EST: SGN-E236640 Direction: 5' Facility: TIGR
Clone: SGN-C175622 [TUS-21-N4] Trace: SGN-T190746 EST: SGN-E378132 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378133Length: 585 bp (908 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378133 [] (trimmed) CCGAACCCGCCTTTGGCTTGGTACATTTGACACCGCTGAAGAAGCTGCTCTGGCTTACGACAAGGCGGCGTATATGCTTCGTGGCGACTTTGCTC
GACTGAACTTCCCTCAACTCCGCCACAACGGCAACCTAATCGGCGGCGACTTTGGTGAATACAATCCATTGCATTCCTCAGTTGATGCTAAGCTA
AAGGACATATGCCAAAGCTTGGCACAGGGGAAGAGCATTGACTCTAAGAAGAAGAAAACCAAAGGGTTGTCGGCGGAGAAAGCGGCGGTGGTGAA
GATGGAGGAAGAGGAGAGCAAAACAGCAGAAGTTGGATCCGAAAGTGACGGGTCCCATTCCGGTTCCGGTGGATCATCGCCGGTGACCGAACTGA
TATTCCCGGAGTTCACTGAGGAAGAGCCAACTTGGGACATGTCAGAAAATTTTTTGTTGCAGAAGTATCCATCTCATGAAATTGATTGGGCCTCT
CTATAAAATTAGAAAATAATTAAGAAAAAAATTAGTAGTAATTATCAAATTAAGTCTAGGTTTAATGAGGTCTTATGTATTTTTTTTTTTTTTGT
ATTTTTGCATTGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378133] SGN-U579555 Tomato 200607 Build 2 111 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190747 [Download][View] Facility Assigned ID: FA0AAD9DG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0115 Quality Trim Threshold: 14.5