EST details — SGN-E378128

Search information 
Request: 378128Match: SGN-E378128
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175584Clone name: TUS-21-L14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175584 is on microarray TOM1 spot ID 1-1-3.4.13.16 [Order] [Tomato Microarray Database]
See unigene SGN-U581535 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15532 [cLED-13-D18] Trace: SGN-T51753 EST: SGN-E236475 Direction: 5' Facility: TIGR
Clone: SGN-C175584 [TUS-21-L14] Trace: SGN-T190743 EST: SGN-E378129 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E378128Length: 619 bp (921 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E378128 [] (trimmed) GACAAAACATCCAAAGAGAGGATGATATATGGTACTACTACAATATATTGTGCATATTGTTACACAACAGCCATATATACACCATACACAATTAA
GTAGATATGAAAGTTGTGTTTGTCTAATATGTAACATACATATATATAATATATGTGCATATACTATTAGTGATTAATAGATAACATAATATTGT
CCGCTTGCTTTATACTTCATTAAGTTTTAATTTAACCGTTGAGATGGCGAAGCATCCATGGAGGCATCACAGAAGCACTGTTTTGTTGTTGTTGC
CGCGATGATCCTTCTACTTCTCCATTGTCTCCTGCATTTGGGTATGCTTCCCCTATGTGAAGATTGTTAAAGGGGTGTGGCAAAACAAACGAAGA
TGAATTGAGATGATCATGACTCTGTTGCTCCCACGGAGTCTGTTGGGCCATCTCTTTCTCCCTTTCCTTAACCTGCTTTGAAAGATTGTTGTTTT
GTTCTTGCAATGCCTTGTCCTTCTTTTGAAGCTCAGAAATGGATTCATGCATCAATTGGTTCTTTCTAGATCGAATGTGCTTAAGAGCAGAATCG
AGCTGGTGTTCCAGATTCTGAAGCTCTTTCATACTCAATGTGTCCAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378128] SGN-U581535 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190742 [Download][View] Facility Assigned ID: FA0AAD9DF07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5