EST details — SGN-E377848

Search information 
Request: 377848Match: SGN-E377848
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175581Clone name: TUS-21-L11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175581 is on microarray TOM1 spot ID 1-1-6.4.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15525 [cLED-13-D10] Trace: SGN-T51749 EST: SGN-E236471 Direction: 5' Facility: TIGR
Clone: SGN-C175581 [TUS-21-L11] Trace: SGN-T190611 EST: SGN-E377849 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377848Length: 728 bp (941 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377848 [] (trimmed) GGTTTAACCATCAATATTTATAAATTTTGAATCTCGAGTACACGAATTCAAAAATGTACAGTGAGTTTTAGTCTAAGAACCTTAAAAGTTAAACA
ATACAAATTCAAAATTCTGAATCCGCTTTCTTGACCTAGCTTAGAGCTCCGGTCTACACTGGCTATAAAAACTCTTCCATTTCTTAGCATGGAGC
AACGATCGTTACGTTATGTACGAGTTAGACGGAGAATCTAGTAGGGTGAAATGACTCAAAGACGATGATCACAGTTCTTTTGACTGGTTCTGTGT
TGATCTGTATATCCGGAATGCTGCAAAGCACATTGTGGCATTACCAATTACTGTCAAAGCTGCTTGTAGAGCCACTACTACCTCAAGAGACTCCG
AGTTATAAAAGAAATGCCAAGTGCAGGCACAGAGTGCTCCTCCAAGCAGGGGCACCTAAATCGGAGAAAAGAAATGGAGATAACTGCTAAATGAT
CAAAGAGAAGCGTGACGCGATAACTCAGCATAAGCAGTCAAACAAAAGTACATCACTTTGTTAAGAAAAAACAACATTTTCACAACTTGAAAAGC
TCTAATTTTTACTGTCTTGTCACTGACTAGATAATAGTAGAACAAAAAAACTCAATAATCAAAATCAACAAAATTTCGACATTTGAACTACGTTG
TCCATGACATGAGAAAGGTAAGAAAGTGAAAAAAGAAACCTGAAGAGCAAGAAGTTCTAAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377848] SGN-U584124 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190610 [Download][View] Facility Assigned ID: FA0AAD9CF06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5