EST details — SGN-E377793

Search information 
Request: 377793Match: SGN-E377793
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175633Clone name: TUS-21-N15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175633 is on microarray TOM1 spot ID 1-1-2.2.13.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15636 [cLED-13-I13] Trace: SGN-T51626 EST: SGN-E236348 Direction: 5' Facility: TIGR
Clone: SGN-C175633 [TUS-21-N15] Trace: SGN-T190554 EST: SGN-E377792 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377793Length: 752 bp (923 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377793 [] (trimmed) CAGGAATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCTAAGAGAAGAAATGGGCTTTTGAAGAAAGCTTATGAGCTTTCAGTTCTTTGTGAT
GCTGAGGTTGCTCTAATCATCTTCTCTAATAGGGGAAAACTCTATGAGTTCTGCAGTAGTTCTAGCATGCTAAAGACGTTGGAGAGGTACCAGAA
GTGCAACTATGGAGCACCTGAACCGAATATATCAACACGAGAAGCACTGGAAATTAGTAGCCAGCAGGAGTACTTGAAGCTTAAAGGACGTTACG
AAGCATTGCAGCGATCACAGAGGAATCTTCTTGGTGAAGATCTTGGTCCTTTGAACAGCAAAGAACTTGAATCACTTGAGAGACAACTTGATATG
TCGCTCAAACAGATCAGATCAACTCGGACTCAGTTAATGTTGGATCAACTTACAGATTATCAGAGAAAGGAACATGCATTGAACGAAGCCAACAG
AACCTTGAAACAAAGGTTGATGGAAGGAAGCCAACTAAATCTGCAGTGGCAGCCAAATGCACAAGATGTGGGCTATGGCCGGCAAACAACTCANA
CTCAGGGCGATGGCTTCTTTCATCCTTTGGATTGTGAACCTACTTTGCAAATTGGGTATCAGAATGATCCAATTACAGTAGGAGGAGCAGGGCCT
AGTGTGAATAACTACATGGCTGGCTGGTTGCCTTGAAAGCTCACGATTCTGATCATAACATTATTATAAATATGCTCAATGGTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377793] SGN-U577553 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190555 [Download][View] Facility Assigned ID: FA0AAD9CG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0078 Quality Trim Threshold: 14.5