EST details — SGN-E377773
| Search information |
| Request: 377773 | Match: SGN-E377773 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175529 | Clone name: TUS-21-J7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175529 is on microarray TOM1 spot ID 1-1-2.2.13.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C15425 [cLED-11-O14] | Trace: SGN-T51516 | EST: SGN-E235506 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175529 [TUS-21-J7] | Trace: SGN-T190536 | EST: SGN-E377774 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E377773 | Length: 676 bp (946 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377773 [] (trimmed)
GGTTTAACCATCAATATTTATAAATTTTGAATCTCGAGTACACGAATTCAAAAATGTACAGTGAGTTTTAGTCTAAGAACCTTAAAAGTTAAACA
ATACAAATTCAAAATTCTGAATCCGCTTTCTTGACCTAGCTTAGAGCTCCGGTCTACACTGGCTATAAAAACTCTTCCATTTCTTAGCATGGAGC
AACGATCGTTACGTTATGTACGAGTTAGACGGAGAATCTAGTAGGGTGAAATGACTCAAAGACGATGATCACAGTTCTTTTGACTGGTTCTGTGT
TGATCTGTATATCCGGAATGCTGCAAAGCACATTGTGGCATTACCAATTACTGTCAAAGCTGCTTGTAGAGCCACTACTACCTCAAGAGACTCCG
AGTTATAAAAGAAATGCCAAGTGCAGGCACAGAGTGCTCCTCCAAGCAGGGGCACCTAAATCGGAGAAAAGAAATGGAGATAACTGCTAAATGAT
CAAAGAGAAGCGTGACGCGATAACTCAGCATAAGCAGTCAAACAAAAGTACATCACTTTGTTAAGAAAAAACAACATTTTCACAACTTGAAAAGC
TCTAATTTTTACTGTCTTGTCACTGACTAGATAATAGTAGAACAAAAAAACTCAATAATCAAAATCAACAAAATTTCGACATTTGAACTACGTTG
TCCATGACATG
ATACAAATTCAAAATTCTGAATCCGCTTTCTTGACCTAGCTTAGAGCTCCGGTCTACACTGGCTATAAAAACTCTTCCATTTCTTAGCATGGAGC
AACGATCGTTACGTTATGTACGAGTTAGACGGAGAATCTAGTAGGGTGAAATGACTCAAAGACGATGATCACAGTTCTTTTGACTGGTTCTGTGT
TGATCTGTATATCCGGAATGCTGCAAAGCACATTGTGGCATTACCAATTACTGTCAAAGCTGCTTGTAGAGCCACTACTACCTCAAGAGACTCCG
AGTTATAAAAGAAATGCCAAGTGCAGGCACAGAGTGCTCCTCCAAGCAGGGGCACCTAAATCGGAGAAAAGAAATGGAGATAACTGCTAAATGAT
CAAAGAGAAGCGTGACGCGATAACTCAGCATAAGCAGTCAAACAAAAGTACATCACTTTGTTAAGAAAAAACAACATTTTCACAACTTGAAAAGC
TCTAATTTTTACTGTCTTGTCACTGACTAGATAATAGTAGAACAAAAAAACTCAATAATCAAAATCAACAAAATTTCGACATTTGAACTACGTTG
TCCATGACATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E377773] | SGN-U584124 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190535 [Download][View] | Facility Assigned ID: FA0AAD9CE04FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 14.5 |
Working
