EST details — SGN-E377731

Search information 
Request: 377731Match: SGN-E377731
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175266Clone name: TUS-20-O8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175266 is on microarray TOM1 spot ID 1-1-1.3.13.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24199 [cLED-7-H8] Trace: SGN-T50435 EST: SGN-E231926 Direction: 5' Facility: TIGR
Clone: SGN-C175266 [TUS-20-O8] Trace: SGN-T189943 EST: SGN-E377732 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377731Length: 660 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377731 [] (trimmed) CTCAACTATATGAAAAAGAACATAAAACTTCAAAAATTTAAGTACATCTCACACAGGAAATATATGTATTACAGTTCAACATTGTGCTAATAGAA
ATAGAAAAGTTGGATGAACATTGTGCTAATAGAAATAGAAAAGTTGGATGAACCAAACTGTAAAAACATCCTTGTCTATTTACAAAAAACCAAAA
AACGGAAGGTCCGAGAGCATGAAAAACGGGTGATTAATCCTCAACAACAAACATACCTACTGCAATTTAACTGAGCGTTAGTTCAGTAACCAACG
TAAATAGGGTTAGTGCAATCTCCCAATCCAAACACCTCAGTACTTTTTGCAAAACCTGCACGATTCAGTCTACCGATCATTACAGAAATGAGAGA
TTGTACATACATCAAATGATGTGAGAGATTGTACATACATCAAATGATGTTTTTTTTCGAGGAGAAGGTTACAGCAAAAGCACCTGTTTATCTCA
TCATTCGCAGGCGATTTTGGTGTCAAAGCTACTGAGGCAGATAGCAAATGCCTGAAATGCAGAGATAGGATACTGATAGTCCATGGTGAACAAAT
CCTCTCCCACTTTCCCAAATTGGAGAATAACATTCTCATTTTCCTGTCCAGCTCCATCCCCAAGAGAAGCAACTAGCTGAAAGTTTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377731] SGN-U580860 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189942 [Download][View] Facility Assigned ID: FA0AAD8BH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0082 Quality Trim Threshold: 14.5