EST details — SGN-E377730

Search information 
Request: 377730Match: SGN-E377730
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175262Clone name: TUS-20-O4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175262 is on microarray TOM1 spot ID 1-1-5.3.13.1 [Order] [Tomato Microarray Database]
See unigene SGN-U568798 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C24194 [cLED-7-H24] Trace: SGN-T50438 EST: SGN-E231929 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377730Length: 654 bp (906 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377730 [] (trimmed) AGTGTTTTTTTCAAGTGTAGAGAAAAATGCAAGAGCAAGCGACGAGTTCTATTGCCGCTAGTTCACTACCTTCAAGTAGTGAGAGATCATCTAGT
TCAGCTTTACATCATGAACTCAAAGAAGGTATGGAGAGTGATGATGAGATCAGAAGAGTGCCGGAGATGGGCGGAGAAGCGACGGGGACAACGTC
AGCTTCTGGAAGAGATGGAGTATCGGCCGCCGGTCAAGCTCAACCATCAGCTGGGACTCAAAGGAAGAGAGGAAGAAGCCCAGCTGACAAAGAAA
ACAAAAGGTTAAAAAGATTGTTGAGAAATAGAGTATCAGCACAACAAGCAAGGGAGAGGAAGAAAGCATATTTGATAGATCTGGAAGCAAGGGTG
AAGGAATTGGAAACAAAGAATGCAGAACTTGAAGAGAGGTTGTCTACTTTGCAAAATGAGAACCAAATGCTTAGACATATACTGAAGAACACAAC
AGCAGGTGCACAGGAAGGGAGGAAGTAGACATATGATCGATCTTATGTCGATATGTCAGCATTCTTGTTTAGATCCTATGTAGGCACTGAAGAGA
AATTCTCTTCTGGATTTGAGAATGCATGCTAGTTTCGGGTGGATTGTTCTGATTTGATGCATTGCATACTTGCTACTCTTAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377730] SGN-U568798 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189941 [Download][View] Facility Assigned ID: FA0AAD8BH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5