EST details — SGN-E377574

Search information 
Request: 377574Match: SGN-E377574
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175191Clone name: TUS-20-L5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175191 is on microarray TOM1 spot ID 1-1-4.4.14.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24072 [cLED-7-C12] Trace: SGN-T50348 EST: SGN-E231839 Direction: 5' Facility: TIGR
Clone: SGN-C175191 [TUS-20-L5] Trace: SGN-T1353 EST: SGN-E378510 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E377574Length: 699 bp (868 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377574 [] (trimmed) CAGTGATGGTAAAACCCTTTATTCCAGAACATTTGCTTGGAACAAAGTTGCAAATGTGATGTTCCTAGAGTCACCAGCAGGGGTTGGCTTCTCCT
ATTCCAATACTAGCTCAGATTATGCACAATCAGGCGACAAGAGGACTGCTCAAGATGCATATAGGTTTCTAGTGAATTGGTTCAAGAGGTTTCCA
CATTACAAAAGCAGGGATTTTTACATCATGGGAGAAAGTTATGCAGGATTCTATGTGCCAGAGCTAGCAGACATCATTGTCAAGAGCAACATGCT
AGCAACCACAAACTCCAAGATCCAATTCAAAGGAATCATGATAGGAAATGGTATAATGAACGATGTCACAGATGAGAAAGGGCAATTAGATTATT
TATGGAGTCATGCACTAATCTCTGATGAGACTCATTTAGGCATCCAACAACATTGCAAAACCCAAACTGATGAGACAAAAATATGTGAACAATTT
CAAAGCACAGCTCAAACTGAGTTTGGAAACATAGATCCTTACAACATCTATGGTCCAATTTGTCCCCTTGATGACGACGATTCATCATCATCATC
ATCGTCATCAAGAAGAAGAATATTCAAGAAAAATGGATATGATCCTTGTGAACAACATTATGTTCGCCATTATCTCAATCTTCCTCAAGTTCAAA
AGTCTTTGCATGCCAACCTTTCCTAACCGTTGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377574] SGN-U566079 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190073 [Download][View] Facility Assigned ID: FA0AAD8CF03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5