EST details — SGN-E377508

Search information 
Request: 377508Match: SGN-E377508
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175251Clone name: TUS-20-N17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175251 is on microarray TOM1 spot ID 1-1-8.2.13.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24174 [cLED-7-G4] Trace: SGN-T50518 EST: SGN-E232009 Direction: 5' Facility: TIGR
Clone: SGN-C175251 [TUS-20-N17] Trace: SGN-T190008 EST: SGN-E377509 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377508Length: 731 bp (925 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377508 [] (trimmed) GTATTCTCTTACTAACAAAGGCACCCGAATTATTCGTTACACTATTTCTGATAATTTTTTTATTGACAACACGACTAAATAAGCAACAACCACAT
ACAGTAGGAAGTTCTAAACACAGGCTAGGAACAGGACTCTAAATTTCGCCGTCTAGACTATGTAACCACCATGTTATTTATAACCCTTTGTATCC
TTGCCTACAAAATTATCATAAGAATGAGAAAAATACTGGAGCTTCTCTTTCATTAGTCAGAAATTCTGATCTCAACTCCCAGTAGGTCCTTCACT
TGCTCATACGCCACGAAAGCAATAGATATTGAAGGAACAACCTTCACTGAATTGGGCACTAAACCCTTGTACAAGGCTCTGACACCCTCATACTT
CACAGTTTTCCTGAAAGCATCAATCATTCCAGTATATTCGAGAGGAGCCTTGCTCCTCCCATCACCAGTAACAATAGATGCAGCATGACTCCATC
CCACCATCTGCATCCTTCTACGAATAACATCAAGAGGGTAGGCAACCGTTTGTCCAACTGTTCCTGCAGCAGCTCCACATGCCAGCCTTGTAACA
ACCCCAAGCTCAGAATTATCAACAAGACCAAATGGTTTTGTTTTGACCAACCAGTCTTTTAAAGATTCATATACAGCAAAATTAAGCCCCACATA
TGGAATAACTCCTATGACAGAAGGAGTCCATCCTTTGTACAAAGCTCGTGGACCCTCCTCGCGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377508] SGN-U568441 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190007 [Download][View] Facility Assigned ID: FA0AAD8CG09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0041 Quality Trim Threshold: 12.5