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EST details — SGN-E377476

Search information 
Request: 377476Match: SGN-E377476
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175097Clone name: TUS-20-H7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175097 is on microarray TOM1 spot ID 1-1-2.4.14.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23948 [cLED-6-M19] Trace: SGN-T49937 EST: SGN-E232951 Direction: 5' Facility: TIGR
Clone: SGN-C175097 [TUS-20-H7] Trace: SGN-T1345 EST: SGN-E378256 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175097 [TUS-20-H7] Trace: SGN-T189976 EST: SGN-E377477 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377476Length: 698 bp (942 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377476 [] (trimmed) GGTTTAACCATCAATATTTATAAATTTTGAATCTCGAGTACACGAATTCAAAAATGTACAGTGAGTTTTAGTCTAAGAACCTTAAAAGTTAAACA
ATACAAATTCAAAATTCTGAATCCGCTTTCTTGACCTAGCTTAGAGCTCCGGTCTACACTGGCTATAAAAACTCTTCCATTTCTTAGCATGGAGC
AACGATCGTTACGTTATGTACGAGTTAGACGGAGAATCTAGTAGGGTGAAATGACTCAAAGACGATGATCACAGTTCTTTTGACTGGTTCTGTGT
TGATCTGTATATCCGGAATGCTGCAAAGCACATTGTGGCATTACCAATTACTGTCAAAGCTGCTTGTAGAGCCACTACTACCTCAAGAGACTCCG
AGTTATAAAAGAAATGCCAAGTGCAGGCACAGAGTGCTCCTCCAAGCAGGGGCACCTAAATCGGAGAAAAGAAATGGAGATAACTGCTAAATGAT
CAAAGAGAAGCGTGACGCGATAACTCAGCATAAGCAGTCAAACAAAAGTACATCACTTTGTTAAGAAAAAACAACATTTTCACAACTTGAAAAGC
TCTAATTTTTACTGTCTTGTCACTGACTAGATAATAGTAGAACAAAAAAACTCAATAATCAAAATCAACAAAATTTCGACATTTGAACTACGTTG
TCCATGACATGAGAAAGGTAAGAAAGTGAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377476] SGN-U584124 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189975 [Download][View] Facility Assigned ID: FA0AAD8CD04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5