EST details — SGN-E377468

Search information 
Request: 377468Match: SGN-E377468
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175055Clone name: TUS-20-F13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175055 is on microarray TOM1 spot ID 1-1-4.2.13.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E377468Length: 619 bp (872 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377468 [] (trimmed) GGGAATGTTAATATTGTAAAATCATATGGATTTTGTTTTGTTGATAAAAGAAGAGGTGATTGGAAGAAGAAAATGAAAAGGGAGTTAAGAATTCA
TGCCTCTTGGCCAGATTTGTCAAGACCAGCTGCTGTTGAGATGCAACCAATTGAGAGTAGTGAACAACTTGATCAGATTTTAGACTCTGCTAAAG
AGCTTTCACAACCTGTCATCATTGATTGGATGGCAGCTTGGTGCCGGAAATGCATATATTTGAAGCCTAAATTGGAGAAACTTGCTGCTGAGTTT
GATACCAAAGTCAAATTCTACTATGTGGATGTCAATAAAGTGCCACAAACTTTAGTGAAGAGAGGAAACATCTCAAAAATGCCAACAATTCAGTT
GTGGAAATATGGAGAAATGAAAGCTGAGGTGATTGGAGGGCACAAGGCGTGGCTTGTAATTGAAGAAGTGAGAGAAATGATCAAAAACTTTGTGT
AGTTATTACTAGTCCAATTAAACAAATTATTTATTTTGCTATGTCAAAAGTTTGACATCAATTTGTATATTCAGCAAAGGGCATTTAAATATGTA
CAGTAGTTACAAAGAATCCTTTTGCATTATCAAATATGGTGAATTGGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377468] SGN-U570719 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189967 [Download][View] Facility Assigned ID: FA0AAD8CC07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.929 Expected Error Rate: 0.0002 Quality Trim Threshold: 12.5