EST details — SGN-E377439

Search information 
Request: 377439Match: SGN-E377439
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175606Clone name: TUS-21-M12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175606 is on microarray TOM1 spot ID 1-1-5.1.13.17 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15587 [cLED-13-F9] Trace: SGN-T51709 EST: SGN-E236431 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E377439Length: 531 bp (924 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377439 [] (trimmed) CTTATGCATACTCATTTTCTTCACTCAATTTTTTAACTCTTTTTTTTTTCTTGGATAATGGCACTGACCCTTCTTCATTCTCCCCTTAATTATCA
CATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTTTTTTTGTTTTCACAATTCTT
GCACCTTACAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTCATTGTCTCTGGATGTCCAAT
TCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGACGAGGAGAAGTGTCTAAAGAGAGGTCATTTTTCCCAGGAAT
TGACAAAGAAAAAACTAGCAATGATGATTATGATAGCTGATATCATCAGCCAGAGAAGAAGAGAAGACTTTTGCCTAATCAAGTTCAGTTTCTTG
AGAAGAGTTTTGAGGTAGATAACAAACTTGAACCATAGAGGAAAGTTCAATTGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377439] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190489 [Download][View] Facility Assigned ID: FA0AAD9BG06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.932 Expected Error Rate: 0.0082 Quality Trim Threshold: 14.5