EST details — SGN-E377428
Search information |
Request: 377428 | Match: SGN-E377428 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175520 | Clone name: TUS-21-I22 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175520 is on microarray TOM1 spot ID 1-1-3.1.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C15411 [cLED-11-N23] | Trace: SGN-T51389 | EST: SGN-E235379 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175520 [TUS-21-I22] | Trace: SGN-T190479 | EST: SGN-E377429 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E377428 | Length: 579 bp (911 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377428 [] (trimmed)
AAACAAATAATCAAAGATATATTATACCACAAAGTATTATTTTAAAAAGAGCAATGATTAGTGAAGTGCTTTCTTTAATCAAATTGTATAATCAA
TTACTAATAAGTACTATATAATAAGACGGTTCACCATCCATCTGGTCACCTACTTATTATTCTTTATGCACTTTTTATCATTAAAATAAAAACTA
TATACCTTGTATACATCGAATATGGTACTATTATTAATGAACACAGTAATAATATAGAAAATAGACATCCATATGGAGCCCAAAACTTTGTTCTG
GGCTCTTTTGAAAGCCCAATAATGAAGTACTAAGTAGGGCCACAATTACATAATTGTGCATCCTTGACCATCTTCTTCATTATAGTAATCATTGT
TTCCGTAATAACCCTTTCCATAGCTAGATGGGCCCGGGCCGGGCCCATATCCATACGAGTAGTTACCGTAGTATGGGGCGGGTTGTGGGGGTACG
GGTGTTCCATAATATTGATAACACGGGCCACCGGTATAATGGCATTGCCCACAGCCACAACTTGGCATTACCTGTGGGTATCCGTGGACCGGAGG
CATCATCAT
TTACTAATAAGTACTATATAATAAGACGGTTCACCATCCATCTGGTCACCTACTTATTATTCTTTATGCACTTTTTATCATTAAAATAAAAACTA
TATACCTTGTATACATCGAATATGGTACTATTATTAATGAACACAGTAATAATATAGAAAATAGACATCCATATGGAGCCCAAAACTTTGTTCTG
GGCTCTTTTGAAAGCCCAATAATGAAGTACTAAGTAGGGCCACAATTACATAATTGTGCATCCTTGACCATCTTCTTCATTATAGTAATCATTGT
TTCCGTAATAACCCTTTCCATAGCTAGATGGGCCCGGGCCGGGCCCATATCCATACGAGTAGTTACCGTAGTATGGGGCGGGTTGTGGGGGTACG
GGTGTTCCATAATATTGATAACACGGGCCACCGGTATAATGGCATTGCCCACAGCCACAACTTGGCATTACCTGTGGGTATCCGTGGACCGGAGG
CATCATCAT
Unigenes |
Current Unigene builds | |||||
[SGN-E377428] | SGN-U577853 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190478 [Download][View] | Facility Assigned ID: FA0AAD9BE11FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.943 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |